Aptenodytes forsteri (emperor penguin): 103896245
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Entry
103896245 CDS
T08527
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103896245 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afor03400
]
103896245 (LIG4)
Enzymes [BR:
afor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103896245 (LIG4)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103896245 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
103896245
NCBI-ProteinID:
XP_009274325
UniProt:
A0A087QVU4
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASTPASQPSEKTVASHVPFADLCSTLERIQTCKSRPEKTKYFKEFLDSWRKFHDALHQK
KKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKGGKDAAKLLNYRTPA
GSCGDAGDFAMVAYFVLKPRCPKQGRLTIEQVNDHLDAIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLS
DVSIMLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHKVFKSNVQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNDQKLGHEVLSRRYEILSSVFTPVTGRIHVVHKTSARTRKEVID
ALNEAIDNREEGIMVKDPTSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAETPPPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPC
NILCGTEKPEMYIEPCNSVIVQVKAAEIVSSDMYKTDCTLRFPRIEKIREDKEWYECMTS
DMLEDLRSKAEGKLASKHLHIDEYDEPQEKKRKTVSKVKKIIGIAEQFKAPDLSNVSKVS
NVFEDVEFCVMTGMGKYSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIASN
KYDVVRAEWLLQCFQTKMLVPWQPACMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLKE
VFSRMKDNKVMPLDMIVKLEERYSWNSCPLSIFRGNTIYVDCYAVVNEPGTRIHGTTLSI
RALELRFYGAKVVSHLEEGISHVVIGEDHSRLREVKALRRTFGKKFKIVSELWVTESVEE
GVPKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacacctgcttcgcagccttctgaaaaaacagtggcctctcacgtccctttc
gcagatctgtgttctactctggagcgaatacagacgtgtaaatctcgcccggagaaaacc
aagtatttcaaggaattcctggattcctggagaaaattccatgatgcccttcatcaaaaa
aagaaagacgtcacggattctttttatccagctatgcggcttattcttccacagttggaa
agagaaaggatggcgtatggaattaaagaaactatgcttgcgaagctgtatattgaactg
cttaacttaccaaaaggtggcaaagatgctgcaaagcttttaaattacaggacacctgct
ggctcatgtggagatgctggagattttgcaatggttgcatactttgtgttaaaacccagg
tgcccaaaacaaggcagactgacaatagaacaagtcaatgatcacttagatgcgatagct
aataataatgctgctaaaaacaagggtctgttaaagaaaagtcttcttcagttaattacc
cagagcacagcactggaacaaaaatggctcatccggatgattataaaggatctaaagctt
ggtgttagtcaacaaactatattttccatttttcatcctgacgctgctgaattgcacaac
gtcacaactgatttggaaaaagtttgcagacaactgcacgatccctctgtctcactcagt
gatgtttccatcatgttgttttctgcctttaaaccaatgcttgctgctattgctgacgtc
cagcaaattgagaaacaaatgaataaccaaatattctacatagaaactaagctggatggt
gaacgtatgcagatgcacaaagatggagacgtgtataaatatttttcccgaaatgggttc
gactatactcagcagttcggtgcttccccccttgacggttcattaaccccatttattcat
aaagtatttaaaagcaatgtacaaaattgcattctcgatggtgaaatgatggcttacaat
ccggagacgcaaacctttatgcaaaaaggaaacagatttgacatcaaaagaatggtggag
gactctgatctgcagacgtgcttctgtgtgttcgatgtattgatggttaacgatcagaag
ttgggtcacgaagtactaagcagaagatatgaaatcttaagtagtgtatttaccccggta
acgggcaggatacatgttgtgcataaaacaagtgccagaacgagaaaagaagtgattgat
gctttaaatgaggcaatagataacagagaggaagggattatggtgaaagaccccacgtcc
acctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccggaatacgtcaat
gggctgatggatgaactagaccttttaattgttggtggttactggggaaagggctcacgt
ggtggaatgatgtctcattttctgtgcgctattgcagagacgcctcctccaaatgaaaaa
cctaccgttttccactctatttgtcgtgttggctctggctataccatgaaggaattgtat
gatttaggtttgaaactggctaagcactggaagccctaccataggaaggaccctccctgt
aacattttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtcata
gttcaggtcaaggcagccgagattgttagcagtgacatgtacaagactgactgtactttg
agattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgacttca
gacatgttagaagatctcagaagcaaagcagaagggaagctggcatctaagcaccttcat
atagatgagtatgacgagccacaagagaaaaaaaggaaaactgtgtcaaaggtgaagaag
ataattgggatagctgagcaatttaaagctcctgatctttctaatgtaagcaaggtttca
aatgtatttgaagatgttgagttttgtgttatgacaggaatgggaaaatactcaaagtct
gaactggagagcagaatagccgaatgcggtggcagcgtggtacagaacccggggccggag
acttactgtgtcattgtaggggctgagaatgtcagagtgaaaaacatcattgcttccaac
aaatacgatgtggtgagggcagagtggctccttcagtgttttcagaccaaaatgctggtg
ccttggcagccagcctgtatgattcacatgtctcctgacacaaaagaacattttgctcgt
gagtatgattgttatggagacagctacacagcagacacagatgttgcacaactcaaggaa
gtgttctcgagaatgaaagacaataaggtgatgccgttggacatgatcgtaaagttagaa
gaacgttactcgtggaacagttgtccgctcagtatattcagaggaaacactatttacgtg
gactgttacgctgttgttaatgagcccggaaccagaatccatggaacaacactatcaatt
agagctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggcatc
tcccatgttgttataggagaagatcattcccggctaagagaggtgaaagcactcaggaga
acatttgggaaaaaatttaaaatcgtatctgagctgtgggtaacggagtccgtggaggaa
ggagtcccaaagaatgaaaatcagtacttaatttaa
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integrated database retrieval system
