Aptenodytes forsteri (emperor penguin): 103902591
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Entry
103902591 CDS
T08527
Symbol
THBS1
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-1
KO
K16857
thrombospondin 1
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor04115
p53 signaling pathway
afor04145
Phagosome
afor04148
Efferocytosis
afor04350
TGF-beta signaling pathway
afor04510
Focal adhesion
afor04512
ECM-receptor interaction
afor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103902591 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103902591 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103902591 (THBS1)
04148 Efferocytosis
103902591 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
103902591 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103902591 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103902591 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afor04131
]
103902591 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
afor00536
]
103902591 (THBS1)
Membrane trafficking [BR:
afor04131
]
Endocytosis
Phagocytosis
Opsonins
103902591 (THBS1)
Glycosaminoglycan binding proteins [BR:
afor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103902591 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
103902591
NCBI-ProteinID:
XP_009281932
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MGPTTVLFLLLVLGISEAKRAAESRSDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPES
SSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSG
HVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKPC
EGEARENKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGE
AKGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKE
VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNXIWPPCQYVYNVDQRDTDLDGV
GDQCDNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDG
KGDACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPEN
VDISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFS
GTFFINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNST
TGPGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGK
KIMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggggccaacgactgttctcttcctcctcctcgtgctcggcatctcggaggccaagcgt
gctgcagagtccaggagcgatgataacagcgtcttcgatctctttgaactcattggcttc
attcgaaagggagctgggcgccgggcacccggggtgcacctggtgaagggaccagaatcc
tccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactccaag
ttccaagacttattagatgctatccatgctgagaagggcttcatcctcctggccaccctc
cggcaagccaagaagagtagaggcacgctgctgtctgtggaacagaaagatggctctggt
catgtcttcagtctagtatcaaatggcaaggcaggcaccctggacctgagcctttctggt
gatggcaagcagcaattagtgtcagtagaggatgccttgctagctacaggacattggaag
aatatcaccctgtttgtgcaggaggaccgggctcagctctatgtggggtgtgagaaaatg
gagaatgctgaactggacatccccatccagaacatcttcactagggacctggccagcagt
gccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctgcagaat
gtgcggtttgtgtttggaacaactctggaaactatcctgaggaacaaaggctgctccagc
tccactagtgcgatcattaccttggacaaccccatcaatggttccagcccagctatccgc
actaattacattggccataaaacaaaggacatccaagcagtctgtggtttttcctgtgat
gaactaacaaatatgtttgtggaactgcaagggctccggtccatggttacaacacttcaa
gacagagttcgcaaagtgactgaagaaaatgaactcattgccaaagtggtccagatcact
cctggagtatgcattcataatggaatcttgcacaaaaacaaagaagagtggactattgac
agctgcactgaatgtacctgccagaactctgccactatatgccgcaaagtgtcctgtcct
ctcatgccttgttccaatgccactgtgcctgatggggagtgctgcccccgatgctggcct
agcgactacgcagatgatggatggtctccttggtctgaatggacttcatgttctgtcacc
tgtgggaacgggattcagcagagagggcgatcctgtgacagtctcaataaccgctgtgaa
gggtcttctgtacaaactcggacttgccaccttcaggagtgcgataagagatttaaacag
gatggtggctggagtcactggtcaccatggtcttcatgttctgtcacttgtggcacgggc
atcatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaaccttgt
gagggtgaggcaagagaaaacaaatcctgccagaaagatccttgcccaattaatggcaac
tggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcaaaaa
cgtagtcgtctctgcaataatcctgagcctcagtatggtgggaagacttgcgtaggtgaa
gctaaagggactcaagtctgcaacaaacaggactgtccaattgatgggtgtctgtctaat
ccttgctttgcggggactacgtgtaccagctcccctgatggttcctggaagtgtggtgcc
tgtcctgctggctaccatggtgatggtgtccactgccaagatattgatgagtgcaaagag
gttcctgatgcctgctttgtcttcaacggagtgcacaggtgtgagaatactgaacctggg
tacaactgtctgccttgtccaccacgtttcactgggacacagccatttggtcgcagtgtt
gaggatgccatggctaacaaacaggtctgcaagccacgtaatccatgcacagatggaaca
catgactgcaacaagaatgccaaatgcaattaccttggccacttcagtgaccccatgtat
cgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatactgac
ttggatgggtggccaaatgagaaccttgtttgtgttgccaatgccacttaccactgtaaa
aaagataactgccctaatctgcccaactctgggcaggaagactatgataaggatgggatt
ggtgatgcctgtgacaatgatgatgacgatgatggtattcctgatgaccgggacaactgt
ccattcatctacaacccacagcagtatgactatgatagggatgatgttggtgaccgctgt
gataactgcccctacaatcacaaccctgatcaaactgacactgacaacaacggagaagga
gatgcgtgtgcagtggatattgatggagatggggtccttaatgaaagggacaactgaata
tggcccccctgccaatatgtctacaatgtagaccagagggatacagacttggatggtgtt
ggagatcagtgtgataactgtccactggaacacaatcctgaccaggaagacactgattct
gaccgcataggtgatcagtgcgacaacaaccaggacatagatgaagatggccatcaaaat
aatcttgataactgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatgga
aaaggtgatgcctgtgaccatgatgatgacaatgatggtatccctgatgacaaagacaac
tgcagattggttgccaacccagatcaagctgattctgatggtgatggacgtggagatgct
tgcaaagatgactttgaccaagacagcgtgccagatattgatgatatctgtcctgaaaat
gtggacattagtgaaactgatttccgaagatttcagatgattcccctggatcccaaggga
acatcccaaaatgatccaaactgggttgttcgtcaccagggtaaagaactggttcagaca
gtcaactgtgaccctggccttgcagttggttttgatgaattcaatgctgtggacttcagt
ggcaccttcttcatcaatacagaaagggatgatgattatgctggcttcgtatttggctac
caatctagcagtcgtttctatgttgtcatgtggaagcagatcacccagtcttactgggac
tccacaccaaccaaagctcaaggctactcgggtctctccatcaaagtggtgaattccacc
actggtccaggagaacaccttcgtaatgctttgtggcacacaggaaacactcctggccag
gtgagaactttgtggcatgacccgcgtcacataggctggaaagacttcactgcatacaga
tggcgtcttagccatagaccaaagactggttacatcagggttgtaatgtacgaagggaag
aaaatcatggcagactcgggaccaatctatgataaaacctatgctggtggtcggctagga
ttatttgtcttctctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagat
ccataa
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