Aptenodytes forsteri (emperor penguin): 103903790
Help
Entry
103903790 CDS
T08527
Symbol
DDX58
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor04622
RIG-I-like receptor signaling pathway
afor04623
Cytosolic DNA-sensing pathway
afor05164
Influenza A
afor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103903790 (DDX58)
04623 Cytosolic DNA-sensing pathway
103903790 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103903790 (DDX58)
05168 Herpes simplex virus 1 infection
103903790 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
afor04054
]
103903790 (DDX58)
Enzymes [BR:
afor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103903790 (DDX58)
Pattern recognition receptors [BR:
afor04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103903790 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
CARD_2
Helicase_C
VMAP-M14
Motif
Other DBs
NCBI-GeneID:
103903790
NCBI-ProteinID:
XP_009283331
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MTAEEKRSLQCYRRHVERRLNPVYILSDVTHWLSDDVKERARXEEEKGVTAAAALVLDAI
LQLEAEGWLRGFLDALVAAGYTGLAEVIENWDFSKXEKLELHRQLLKRIEASGLEIDLVA
LMPYINTSLIERECDEIMQVVNDTIFQINKNYFGTQKYEHWIVATQKKYRLLQLADKEEE
SSICRDLFICTEHLWKFNDALIIIEDAHIEDALAYLTDFFTNVKNGPHTELEKQLTAKFQ
EKKPELTALSKDESNENPKLEELACILDEALRYNLQTRTLLFAETRALVAALKRXIEASP
LLSYVKPDVLMCRGRRDQKTGMTLPMQKGVLDAFKTDKDSRLLIATSVGDEGIDISECNL
VVLYEYFCNVTKTIQVRGHERARGSKCILVTSKTGVVENEKHNCYEEEIMNEAIEKLQNX
DEATLARKIHDLQMKEKVLXDSRKKETGPKVVQGNKNLLCGKCKAYACSTDDIRVIKECH
HTVLGDTFKERYVTKPHQKPVQFDFFEKKSKMHCQNTNCQHDWGITVKYKTFGNLPVIKI
KSFVVENVETGTQMDFQKWKNINFSLKNFDVEEMSSRTQHFSACITLLH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggaggagaagaggagcctgcagtgctacaggcggcacgtcgagaggagactg
aaccccgtctacatcctgagcgacgtgacgcactggctgtccgacgacgtgaaggagaga
gcccggntggaggaggagaagggggtgacggcggccgccgccctggttctggatgccatc
ctgcagctggaggcggagggctggctccggggcttcctggacgccctggttgcagcaggt
tacactggactggcagaagtaattgagaactgggacttcagcaaanctgaaaaactggag
ttgcacagacagctgttgaagcggatagaagcgtcagggctagaaattgatctggtagca
ctcatgccctacataaacacgtccctgatagaaagggagtgtgatgagatcatgcaggta
gttaatgatactatctttcagatcaacaagaattattttggaacacagaaatatgaacac
tggatagttgccactcagaagaaatacagactgttgcaactggcagataaggaggaggag
agcagcatttgtagagaccttttcatttgcactgaacacctttggaaattcaacgatgcc
ctcatcatcattgaagatgcccacatcgaagatgctttagcctacctaactgattttttc
acaaatgtcaaaaatggaccacatacagagttagagaagcaactgacagccaaatttcaa
gagaaaaagccagaactgactgccctttcaaaagatgagtcaaatgagaatcccaagctg
gaagagcttgcttgcatcctggatgaagcactccgttataacctacagactcgcactctt
ctcttcgctgagacaagagccttagtagctgctttgaagaggtgaatagaagcaagccct
ctacttagctacgtaaagccagatgtgttgatgtgtcgtggaagaagagatcaaaaaaca
ggtatgaccctcccaatgcagaagggtgtactggatgcattcaaaaccgacaaagacagc
agactgctaattgctacatctgttggtgacgaaggcattgatatttctgagtgcaacctt
gttgtgctctatgaatacttctgtaatgtcaccaaaacgatccaagtcagaggtcacgaa
agggcaagaggcagcaagtgcatccttgtgacaagcaaaacaggagtggttgagaatgag
aaacacaactgttacgaggaagaaattatgaatgaagctattgaaaagctacagaattag
gatgaagcaacacttgcaagaaagatacatgacctgcaaatgaaggaaaaggtattatga
gattccaggaagaaagaaacaggacctaaggtagtgcaagggaacaaaaatctcctgtgt
ggaaaatgcaaagcatatgcctgcagtacagatgacatcagagttataaaggaatgtcat
cacactgtgctaggagacacgttcaaggagcgttacgtgacaaagcctcaccagaaacca
gtccagtttgatttttttgagaaaaaaagcaagatgcattgccaaaatactaattgccag
catgactggggaatcacagtgaagtacaagacatttggtaatctaccagtgatcaaaatc
aaaagctttgtagtagagaatgttgaaactgggacgcaaatggattttcagaaatggaaa
aatattaatttttctttgaagaattttgatgttgaagaaatgtctagccgaactcagcat
tttagtgcatgcatcaccctactgcactaa
DBGET
integrated database retrieval system
