Acidithiobacillus ferriphilus: K1Y48_02780
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Entry
K1Y48_02780 CDS
T07843
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
afp
Acidithiobacillus ferriphilus
Pathway
afp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K1Y48_02780 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afp03400
]
K1Y48_02780 (nth)
Enzymes [BR:
afp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K1Y48_02780 (nth)
DNA repair and recombination proteins [BR:
afp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K1Y48_02780 (nth)
Prokaryotic type
K1Y48_02780 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UEP59601
LinkDB
All DBs
Position
557977..558627
Genome browser
AA seq
216 aa
AA seq
DB search
MDPQNIHRCFAALRAAIPEPKTELIYHSPFQLLVAVVLSAQSTDKAVNACTQTLFAAAPT
PDAMATLGEDGIKTHIRRLGLFNAKARHVHALAQQLLALHDGEVPADRKALEALPGVGRK
TANVVLNTQFGHPTIAVDTHIFRVGNRIGIAPGKTPLAVEQALLAAVPAEYLQDAHHLLI
LHGRYTCTARRPHCGHCPLFQCCEWTDKHQWAAKPS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggatccacaaaacatccatcgctgttttgcggctctgcgcgccgccattcctgaaccc
aaaactgagctgatctatcactccccttttcagcttctggtcgccgtggtgctctccgcg
caaagtacggacaaagccgtcaacgcctgcactcaaacactttttgccgcggcgcctacc
cccgacgcgatggcgacgctcggtgaggacggcatcaagacccatatccgtcgcctgggg
ctattcaacgccaaggcccgtcatgtgcatgccctggcgcaacaactgctggccctgcat
gacggcgaagtgcccgcagaccggaaggcgctggaagcgctccccggtgtcgggcgtaaa
accgccaacgtcgtcctcaatacccaattcgggcaccccaccattgcggtggatacccat
atcttccgggtaggcaaccggataggtattgctcccggcaaaacccctctggccgtcgaa
caggccctgctcgcggcggtacccgccgaatacctgcaggacgcccaccacctcctgatc
ctccatggccgctatacgtgcacggccagacgtccgcactgtggtcactgtccgcttttc
caatgctgcgaatggacggacaaacatcagtgggcagcgaaaccatcctag
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