Alcaligenes faecalis JQ135: AFA_01965
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Entry
AFA_01965 CDS
T05446
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
afq
Alcaligenes faecalis JQ135
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
AFA_01965 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afq03000
]
AFA_01965 (dksA)
03021 Transcription machinery [BR:
afq03021
]
AFA_01965 (dksA)
03009 Ribosome biogenesis [BR:
afq03009
]
AFA_01965 (dksA)
Transcription factors [BR:
afq03000
]
Prokaryotic type
Other transcription factors
Others
AFA_01965 (dksA)
Transcription machinery [BR:
afq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
AFA_01965 (dksA)
Ribosome biogenesis [BR:
afq03009
]
Prokaryotic type
rRNA transcription factors
AFA_01965 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DUF8581
ATRIP_N
Motif
Other DBs
NCBI-ProteinID:
ASR88325
UniProt:
A0A4P8JN53
LinkDB
All DBs
Position
complement(433902..434339)
Genome browser
AA seq
145 aa
AA seq
DB search
MATKSHDSTTTLLTEQELLAMPESDYMNAAQLEFFKHRLRQLEQDILANAGATTENLRET
QFVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIALIDSGEYGWCEETGEPIGLPRL
LARPTANLSLEAQERREKRQKMFGD
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaagtcacatgacagtactacaaccctgctgaccgagcaggagcttttggcg
atgcctgagtcagactacatgaacgccgcccagctggagtttttcaagcatcgcttgcgc
cagctagagcaagacattctggccaatgcgggcgccacaacggaaaacctgcgtgaaacc
cagttcgttcctgacccggctgaccgtgccacgatcgaagaagaacacgctctggagctg
cgcacccgcgatcgtgagcgcaagctgctcaagaaagtgcaacagtccatcgccctgatc
gattcgggcgaatacggctggtgtgaggaaaccggcgagcccatcggcctgccccgttta
ctggcacgtcccacggccaacctgtctctggaagcccaggagcgtcgcgagaagcgccaa
aaaatgtttggggattaa
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