Alcaligenes faecalis JQ135: AFA_13235
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Entry
AFA_13235 CDS
T05446
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFA_13235 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_13235 (nth)
Enzymes [BR:
afq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AFA_13235 (nth)
DNA repair and recombination proteins [BR:
afq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFA_13235 (nth)
Prokaryotic type
AFA_13235 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASR90335
UniProt:
A0AB33CUM1
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All DBs
Position
2861541..2862179
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AA seq
212 aa
AA seq
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MNAAKRHEIFSRFQAANPKPTTELEYADTFQLLIAVILSAQATDRSVNLATAHFFPEHGT
PQGILAMGEEGLREAIKTIGLYKTKAANVIKTCRILLEQHQGQVPCDRAALEALPGVGRK
TANVVLNTAFGLPTIAVDTHIFRVANRTGIAPGKNVVEVEKKLEKVIPKPFLLDAHHWLI
LHGRYICVARKPKCPQCGISDLCDFKPKTVNT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgccaagcgccacgagattttcagccgttttcaggccgccaaccccaagccc
accaccgaactggaatacgccgacacctttcaactgctgattgcggtgattctgtcggcc
caggccactgatcgctccgtgaacctggctactgcccacttttttcccgaacacggcaca
ccgcaagggattctggctatgggtgaagaagggctgcgtgaagccatcaagaccattggc
ctgtacaagaccaaagccgccaacgtcatcaagacctgtcggattttgctggagcagcat
caaggccaggttccctgtgaccgcgcagcactggaggctcttcctggcgtaggacgcaaa
accgccaacgtggtcttgaataccgcttttggcctgcccaccattgccgtggatacccat
atttttcgcgttgccaaccgcaccggcattgcgccaggaaaaaacgtggtcgaagtggaa
aagaagctggaaaaagtgattcccaagccttttttactggacgcccaccactggctgatt
ttgcatggccgctacatttgcgtggcccgcaaacccaagtgtccccagtgtggtatctcg
gacttgtgtgacttcaagccgaaaaccgttaacacttaa
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