Artemia franciscana: 136025818
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Entry
136025818 CDS
T10524
Name
(RefSeq) telomerase-binding protein EST1A-like isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
afra Artemia franciscana
Pathway
afra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136025818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136025818
03032 DNA replication proteins [BR:
afra03032
]
136025818
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
136025818
mRNA cycle factors
Common to processing body (P body) and stress granule
136025818
DNA replication proteins [BR:
afra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
136025818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
136025818
NCBI-ProteinID:
XP_065557880
LinkDB
All DBs
Position
4:complement(160146..414932)
Genome browser
AA seq
1738 aa
AA seq
DB search
MDLDDQNCGSALLKEEQVVVAGHKMESDKTKSQMQKQKRPEIQRYIPRQRLETPSAEQKV
ESTSVAVKESERLKTVPKSASTGKLDYKKGPNWDSKSPRNVGGSAPKYQQKANEYDRERK
NVTQPITNDTIKMRGESHIKEKAFKDGGSRQHWQTKRSSFIKSPEPAQYSRSLNRPSSRN
TRINTPEPEKIFSRPGSRTGTPDFRQGLSDDGKKSAIESVVQFMGHKSPLPKVDLEPLKE
VKNVHRYSSRRIGRQETKEEDELSPTQILGGGRPPLQPSRNGGKIKQQENVENIASPPDF
SPRPPSVRRQVASRTPSPSTLVPYPCSSPSKPRQRGPTSAYNLEQNLQNLSIEREYQPVP
DVIPRTTSLNGFPGDYTLGQVLASESNSTTATEELWDGKTLTFGSSGEAQQLPPNYQEKQ
YELELMAMMRQQMYASGQAIQMTSPTPRYAPTPNQVYFGDQQRIVQQRQLMSPGFLSPRQ
QQPFPPQQSQLVQSGVFSPQHQDSFSAMSQQSQLVSPGVLSPQQPPFQTMPQQNPIDNQF
YQQQTNYNYLPKSVTPVQLPYGNPGGPYQMDNQQEQFNMQQFYGYPQGYNVGDNSVGQQR
ATSPVKDNQQMLQNEAMLRDYMLQQQMMRRGQYTNYGSGHDMGSYQVSPKQAEVPPQTLY
QQQSSAQYFNRDGVQLYPITSASMYPLEVARGSSDLNEVASRQVFVPLAGGIDKTQQGQR
QVRGRKMSSPDPASQAVYQNTPAIVQENNDGTNRRLSAEEARRRISAELAAIGSWNEEVE
RSEREEIDKHEEPPTSAKKEEIVFISEDIRYMKKKQDPQTDPTRGIIVLPKTKPSSSGEI
TTATNSTRMQSNERTLYDPNQPLPISATPGSSSGRQDVPGVIASQTVDAQLALGKPAWYS
PYSKSMRESRCNPYTLMDIVRYDEELTGLLKSQGPLSQRVRELQHFFMNAFLQIIVDDIK
FCETENVDSHIWKLAFYNVIESIRRKKGEEPETLQDYDKFLEQIVEEGTQFYIHVLKTLE
EKHNILFEEFIKNPQKKQHGMGMAGLALVAGQKAYIALGDLARYKEQLLAGTGFYAAAKE
WYTKAQLLNPKNGKPYNQLALVAMLAKRKVDAVYFYVRSLMGSNPVESAKDTLVSLFDEN
RKRLEAQERKRREEKQATAQPSAPRTPVRQRKESEIRKEIWIHPLGGKNSHRAATAGPLG
EEKDPYTEELKQMPINEVNRRLITSFVNYQAKLYTKIGMETFREGALMMLKEFEVVVNSN
PMPITLDRILQMLALNMFSIDNTQLKGVDKNQPEYRSAIQENALNVSLEMFRILVVRFLS
ILSIQENNEIRQNEENTLLAAITVWCDWMVCHSSLYCPPPMPDMMIGKTDVWTELAKLAT
ILKSEAAKKNAQIYQQAFPGSKSVFLHEDLFLIGFPPLLRASQDPFFIRPEQDINEAIYC
ARSQRVLYLCCDFLCSTNPPLLKTVQISPNESVYVSAVGNRDENVAVDGDDGNASDVSID
GLSDEEEKLDLSFLTRPPPPIGQSLEVYQLRKKKDELEKKFQSQERQKKKLKELLKNTTC
LELEVHPRLLVADTNCFVDHLQQLQQLARLGPFTLAVPLIVCKELDCLSKRYRGAANTTE
HNELISNAASESLNFLQQRHQHVRCYTTKGTPVQVSSRTISMEEDDGENALNNDDRILSC
CLNLLKEDSYSGPSKDKGRKLVRQVVLLTDDRNLRVKALASDLPVRDVHGFYKWAMDQ
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggacttagatgatcaaaattgtggcagtgcattacttaaagaggaacaagttgttgtt
gctggacacaagatggaatcagacaaaacaaagtcccaaatgcaaaagcaaaaacgtcca
gaaattcaacgctatattcctcgacaaagactggaaactcctagtgcagaacaaaaagtt
gaaagtacttcagttgctgtgaaggaaagtgaaaggttaaagactgtaccaaaaagtgca
tcaactggaaaacttgattataagaaagggccaaattgggattcaaaaagtcctagaaat
gttggtggttctgcacccaaatatcaacagaaagctaatgagtatgacagggaaagaaaa
aatgtgacacaacccattactaatgacacaataaaaatgagaggagaatcccatatcaaa
gagaaagcattcaaagatggaggctcgagacagcattggcagaccaaacgatcttcattc
ataaaaagtcctgaaccagctcaatatagtcgatctttaaataggccttctagtagaaat
actcggattaatacacctgagcctgaaaagattttcagtcggcctggatcccgaactggc
acacctgattttagacaaggtctttccgatgatggaaaaaaatcagcaattgaaagtgtt
gtacaatttatggggcataaaagtccattgccgaaagtggacttagaaccgttgaaagag
gtgaaaaatgtgcatagatatagctcaaggagaataggtagacaagagacaaaagaagaa
gatgaactgtcacctacacaaattcttggaggaggcaggcctcctttacaaccttcaagg
aatggtgggaaaattaaacagcaggaaaatgtagaaaatattgcttccccgccagatttt
tctccaagaccaccatctgtgcgtcgacaagtggcgtctcgaacaccgtctccttcgact
cttgtgccatacccttgcagctccccaagtaaaccgcgacagcgaggccccacatcagcc
tacaacttggagcaaaacctgcaaaatttgtctattgaaagagagtatcaacctgttcct
gatgttattccacggacaacgtccttaaatggttttcctggtgattatacgttgggtcaa
gttttagcatcagaaagtaatagtaccactgccactgaagagctttgggacgggaaaacc
ttaacatttggctcaagtggcgaagctcaacagttgccacccaactatcaagaaaagcag
tatgaattggaactgatggcaatgatgcgtcagcagatgtatgccagtggtcaagccatt
cagatgactagtccaactcccagatatgcaccaacaccgaatcaggtctattttggagat
caacaaagaatagtacagcaaaggcaactcatgtcacctggtttcctctcacctcgacaa
caacagccatttccgccacaacaaagccagctggtgcagtcaggtgttttctcaccccag
caccaagactcattttcagcaatgtcgcagcaaagtcagctcgtatcacctggagttctc
tcgcctcagcaaccgccttttcaaacaatgccgcagcaaaacccgatagacaatcaattt
tatcaacaacagacgaactataattatctcccgaagtctgtgaccccggtgcagctacca
tatggaaaccctggaggtccatatcagatggataatcagcaagaacaatttaatatgcaa
cagttttatggttaccctcaaggttataatgttggagataactcagtcggtcaacagaga
gctacctcgcctgtaaaagataatcagcaaatgctgcaaaatgaagctatgctgcgtgac
tatatgttacaacaacagatgatgcgtagaggacagtatactaactatggttcaggtcat
gatatgggatcctaccaagtgagtccaaaacaagctgaggtgccacctcaaacactttat
cagcaacaatcatcggctcagtatttcaaccgagatggtgtacagctttaccccattaca
tcagcatccatgtatcctcttgaagtggctcgtggcagttcagatttgaatgaggttgct
tctcgacaagtttttgtgcctcttgcaggaggcatagataaaacacaacaaggacagaga
caagtacgtggtcggaagatgagcagcccagatcctgcaagtcaggctgtgtaccaaaat
acaccagccattgtacaagagaataatgatggaacaaacagaaggctgagcgcggaggaa
gcccgacgaaggattagtgcagaactagccgctattgggtcctggaatgaagaagttgaa
agaagcgaaagagaggaaattgataaacatgaagagcccccaactagtgccaaaaaggag
gaaatagttttcatatctgaagatatacgttatatgaaaaagaagcaagaccctcaaacc
gatccaactagaggaattatagttttacccaaaacgaaaccctcgagcagtggggaaata
acaactgcaactaacagcacacggatgcagtccaatgaaaggacactttatgatcctaac
caacctctaccaatttctgcaactcccggttcaagctctggacgacaggacgtgccaggt
gttattgcaagtcaaacggtagacgcccaactcgccctgggtaagcctgcgtggtatagt
ccttattcaaagagtatgagagaatctcgctgcaacccttatactttgatggatatagtt
cggtacgatgaagaactcactgggctattgaaaagtcagggaccgttatcacagagggtt
cgagaacttcagcatttctttatgaacgcattccttcagattatagttgatgatattaag
ttttgtgaaactgaaaatgtggattctcatatttggaagttggctttctacaacgttatc
gaatctattagaagaaaaaagggggaggaacctgaaactctgcaagattatgacaaattt
ttagaacagattgttgaggagggcactcaattttacattcatgtactgaagaccttagaa
gaaaaacacaatattttgtttgaggaatttatcaaaaacccccagaagaagcagcatggc
atgggtatggctggtttagcccttgttgcgggtcaaaaggcttatatagccctcggggat
ttagctcgttacaaagaacaactattagcaggaactggattttatgctgctgccaaagaa
tggtatacaaaagcgcaactgttaaatccaaagaatggaaagccctataaccagcttgct
ctcgttgccatgttagccaaacggaaagtggacgctgtatatttttacgtaagaagtttg
atgggttccaaccctgtggaatctgctaaggacactcttgtatccctctttgatgaaaat
agaaaaaggttggaagcccaggagaggaagaggcgtgaagaaaagcaggcgactgctcag
ccttctgcaccaaggactcctgtcagacaaagaaaagaaagcgaaatcaggaaagaaata
tggatccaccctttaggtgggaagaattctcacagggctgctacagctggacccttaggg
gaagaaaaagacccgtataccgaagagcttaaacaaatgccaattaatgaggtcaatcgg
cgactaattacaagttttgtaaattatcaggcgaaattatacactaaaattggtatggag
acatttcgagaaggtgccctcatgatgctgaaagaatttgaggtggtagttaactccaac
ccgatgccaataaccctggatagaattttacaaatgctagcattaaacatgttttcaatc
gacaatacacaactcaaaggtgtcgacaaaaatcaacccgagtatagatccgctattcaa
gagaacgctttgaatgtatctctagaaatgtttcgtattctcgtcgtaaggttcctaagt
atcctatcaattcaggaaaacaatgagattcgacaaaatgaagaaaatacattacttgct
gcgataacggtctggtgtgattggatggtctgccacagctctctgtactgtccacctccc
atgccagatatgatgattggaaaaacagatgtttggacagagctcgccaagttagcaaca
atattgaaatctgaggctgctaagaaaaacgcccaaatatatcaacaggcgtttcctggt
agcaaatctgtgtttctccacgaggatctctttctgattggtttcccacctttattgcgg
gcatctcaagaccctttcttcattcgacctgagcaagatataaacgaagctatttactgc
gcaagatcccaacgagttctttatctttgctgtgattttctgtgcagtacgaatccacct
ttactgaagacagtacaaatatcgccaaatgaaagtgtctacgtgtcagcggttggcaat
cgtgatgaaaatgttgcagttgatggagatgatggaaacgcttcggatgtatccattgac
ggtcttagcgatgaagaggagaaactagacttatcttttcttactcggcctcctcctccc
attggtcagagccttgaagtctatcagcttcggaaaaagaaagatgagctagaaaagaaa
ttccagtcacaggagcgacaaaagaaaaagctaaaggagctattgaagaacacaacgtgc
cttgaactggaagttcacccacggcttcttgttgctgatacaaattgttttgttgatcac
ctacagcagttacagcaacttgctcgacttggccccttcactctagctgtgccacttata
gtgtgtaaagaacttgattgcttatctaaaaggtatcgaggtgctgccaatacaacggaa
cataacgagctgatcagtaatgctgcttcagagtcgctaaactttcttcagcagcggcat
cagcacgtgcgctgctatacaacgaaaggaacacctgtccaagttagcagtcgcacaatt
tctatggaagaagatgacggagaaaatgctcttaataatgatgatcgtattttgagctgt
tgtttgaacctgcttaaagaagattcatattcagggccatcaaaggacaaaggtagaaaa
ttggtacgtcaagttgtgctgctgactgatgaccggaatttgagagtcaaagctctggct
tcggatcttccggtgcgtgatgtccacggattttataaatgggcaatggatcagtaa
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integrated database retrieval system
