Artemia franciscana: 136027390
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Entry
136027390 CDS
T10524
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136027390
09123 Folding, sorting and degradation
03018 RNA degradation
136027390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136027390
03041 Spliceosome [BR:
afra03041
]
136027390
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136027390
mRNA degradation factors
5'-3' decay
Lsm complex
136027390
Spliceosome [BR:
afra03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136027390
Complex C
U2 snRNP components
136027390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
LNS2
Motif
Other DBs
NCBI-GeneID:
136027390
NCBI-ProteinID:
XP_065560657
LinkDB
All DBs
Position
5:complement(39451850..39486302)
Genome browser
AA seq
102 aa
AA seq
DB search
MAEDGEPAAAMVVEEPLDLVRLSLDERIYVKLRGDRELRGRLHAYDQHLNMVLGDVEETV
TSVEVDEETYEEIYRTTKRNIPMLFVRGDGVILVSPPSRTGA
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatggcgagccagctgcagcgatggttgtagaagagcctcttgatcttgtg
cgcttaagcctcgacgaaaggatttatgtaaaattgcggggtgacagggaacttcgagga
cgactccatgcgtatgatcaacacttaaacatggtactgggagatgtagaagagactgtt
acatcggtggaggttgatgaagaaacgtatgaagagatctatagaacaacgaagcgcaat
ataccaatgctttttgtgcgcggtgatggtgttattctggtgtcaccaccttcaagaact
ggagcataa
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