Aythya fuligula (tufted duck): 116489674 Help Entry 116489674         CDS       T07966                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism aful  Aythya fuligula (tufted duck) Pathway aful04010   MAPK signaling pathway aful04120   Ubiquitin mediated proteolysis aful04140   Autophagy - animal aful04144   Endocytosis aful04620   Toll-like receptor signaling pathway aful04621   NOD-like receptor signaling pathway aful04622   RIG-I-like receptor signaling pathway aful05132   Salmonella infection aful05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:aful00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     116489674 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     116489674 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     116489674 (TRAF6)    04140 Autophagy - animal     116489674 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     116489674 (TRAF6)    04621 NOD-like receptor signaling pathway     116489674 (TRAF6)    04622 RIG-I-like receptor signaling pathway     116489674 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     116489674 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     116489674 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aful04131]     116489674 (TRAF6)    04121 Ubiquitin system [BR:aful04121]     116489674 (TRAF6) Enzymes [BR:aful01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      116489674 (TRAF6) Membrane trafficking [BR:aful04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     116489674 (TRAF6) Ubiquitin system [BR:aful04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     116489674 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Med21 SlyX Sina_ZnF RING_XB3-XBAT31 TRAF3_RING PspA_IM30 zf-RING_11 HAP1_N U-box UPF0242 HMMR_N Spc29 DUF1664 CENP-F_leu_zip DUF16 Cortex-I_coil Motif Other DBs NCBI-GeneID:  116489674 NCBI-ProteinID:  XP_032044102 UniProt:  A0A6J3D4E8 LinkDB All DBs Position 5:complement(49493167..49848016) Genome browser AA seq 545 aa AA seqDB search MSLLQSNNSCGARDLESGCCAAMASACSVGAKEDSVSVSSGTGNPPSSFTEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNKGCCMKMELRHLEDHQSHCDFSTVECPQCQGAFQKNHLKEHMTQ ECLRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTMLIRQQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPAL FSHVSHAPYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNVHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQKAQKEERPVVMHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL AFQRPTIHRNPKGFGYVTFMHLQNLEQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS TDGAV NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctacagagcaataacagttgtggagcccgagacctggaaagtggctgctgt gcagccatggccagcgcctgcagcgtaggagcgaaagaagacagcgtgagcgtcagcagc gggactggaaaccctccgagttcgtttacagaggaaacacaaggatacgacgtggagttt gatccacccttggaaagtaaatatgagtgtccgatctgtctgatggcccttcgggaagca gtgcagacgccgtgtgggcaccgtttctgcaaaggctgcattgtcaaatcaataagagat gcaggtcacaaatgtccagtagacaatgaaattctgcttgaaaatcaactttttcctgac aacttcgctaaacgggaaatcctttcattaacggttaagtgtcccaacaagggctgctgc atgaagatggagctgaggcatttagaggaccaccagtcgcattgtgatttctccaccgtg gaatgcccgcagtgccaaggagcctttcagaagaaccatctgaaagagcacatgacacag gagtgtctgcggcgtcaagtctgttgccccaactgtgccacatctatggcttatgaagat aaagagcttcatgaccaaacctgtccccttgccaatgtattttgtgaatattgcaacaca atgctcatcagacagcagatgcctaaccattacgataatgattgtcctactgccccagta ccatgtttttatagtgcctttggttgtcctgaaaagatgcagaggaatgaactggcacga catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaatatc agtgttactgctacaaatcctgtaccctttatcaatggactgccatttgagcctgccctc ttctcccacgtgtcacatgccccatataattgtaacccagaagttgaaaacttcaaagaa actattcagcagttggaaggtcgcctggtgagacaagatcaccagatcagagaactcatt gctaaaatggagacgcagaacgtccacatggcagaactcaaacgcactattcggaatttg gagggaaaaatcactgaaatggaggcacagcaatgcaatggtatttatatatggaagatt gaaaacttcagtggacttcagaaagcacagaaagaagagagacctgttgtgatgcacagt cctggcttctatactggaaaacctggctacaagctgtgtttgcgcttgcatatccagtta ccaaatgctcagcgctgtgctaattttatctctctgtttgtccacactatgcaaggagaa tacgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa tcagaaggtcctgaacggcagaatcatgaagaagtaatggaagccaagccggagttgctg gccttccagagaccaacaattcaccgcaatcctaaagggtttggttacgtgactttcatg cacctgcagaacttggagcaaagaaccttcgtaaaagatgacacccttctggtgcgctgt gaagttctaacgcggctagatttgaacagccttcgcagagaaggatttcaagctcgcagt actgatggtgctgtgtaa

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