Aythya fuligula (tufted duck): 116489983 Help Entry 116489983         CDS       T07966                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism aful  Aythya fuligula (tufted duck) Pathway aful04115   p53 signaling pathway aful04145   Phagosome aful04148   Efferocytosis aful04350   TGF-beta signaling pathway aful04510   Focal adhesion aful04512   ECM-receptor interaction aful04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:aful00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     116489983 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116489983 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     116489983 (THBS1)    04148 Efferocytosis     116489983 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     116489983 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     116489983 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     116489983 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aful04131]     116489983 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:aful00536]     116489983 (THBS1) Membrane trafficking [BR:aful04131]  Endocytosis   Phagocytosis    Opsonins     116489983 (THBS1) Glycosaminoglycan binding proteins [BR:aful00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116489983 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS cEGF TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  116489983 NCBI-ProteinID:  XP_032044685 UniProt:  A0A6J3D2T0 LinkDB All DBs Position 5:complement(38507936..38523083) Genome browser AA seq 1178 aa AA seqDB search MGPAALLVLVLLLLRGGSEARRTAESRGDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGP ESSSPAYRIEDASRIPAVPDAKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLAVEQKDG SGHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCE KMENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGC SSSTSAIITLDNPMNGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTT LQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVS CPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNR CEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLNGK PCEGEARETKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCV GEAKGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGIHCEDIDEC KEVPDACFHFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTD GTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYH CKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGD RCDNCPYNHNPDQIDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQ CDNCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD ACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDI SETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTF FINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGP GEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIM ADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3537 nt NT seq  +upstreamnt  +downstreamnt atggggccggcggcgctcctcgtcctcgttctcctcctcctgcgcggcggctcggaggcc cggcgcacggcagagtccaggggtgatgataacagcgtcttcgatctctttgagctcatt ggctttattcgcaagggagctgggcgccgggcgcccggggtgcacctggtgaagggacca gagtcctccagccccgcttaccgtatcgaagatgccagtcgcatccctgctgtccctgac gccaagttccaagacttgttagatgccatccatgccgagaagggcttcatccttctggcc actctccggcaagccaagaaaagcagaggcacgctgttggctgtggaacagaaggatggc tctggtcatgtcttcagcctagtttcaaacggcaaggcaggcaccctggacctgagcctc tccggtgatggcaagcagcagttggtgtctgtagaggatgccttgctggctacgggacac tggaagaacatcaccctgtttgtgcaggaagacagggctcagctttatgtagggtgtgag aaaatggaaaatgctgaactggacattcccatccaaaacatcttcacaagggacctggcc agcagtgccagactccgtatcgccaaagggggagtcaatgacaacttccagggactgctg cagaatgtgcggtttgtctttggaacaactctggaaactatcctgaggaacaaaggctgc tccagctccactagtgcaatcattactttggacaaccccatgaatggttccagcccagct atccgcactaattacattggccataaaacaaaggacatccaagctgtctgtggcttttcc tgtgatgaactaaccaatatgtttgtggaactgcaagggttacggtccatggttacaaca cttcaagacagagttcgcaaagtgactgaagaaaatgagctgattgccaaagtggtccag attactcctggagtatgcattcataatgggatcttgcacaaaaataaggaagagtggact attgacagctgtactgaatgtacttgccagaactctgccactatatgccgcaaagtgtct tgccctctcatgccttgttccaatgccactgtgcctgacggggaatgctgcccccgatgc tggcctagcgactatgcagatgatggatggtctccttggtctgaatggacttcatgttcg gtgacctgtggcaatgggattcagcagagagggcgttcctgtgacagtctcaataaccgc tgtgaagggtcttctgtacagactcggacttgccaccttcaggagtgtgataagagattt aaacaggatggtggctggagccactggtcaccatggtcgtcatgttctgtcacttgtggc acgggcatgatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaa ccttgtgagggtgaggcaagagaaaccaagtcctgccagaaagatccttgcccaattaac ggcaactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggactt caaaaacgcagccgtctctgcaataatcctgagcctcagtatggtgggaagacctgcgta ggtgaggctaaaggaactcaggtctgcaacaaacaggactgtccaattgatgggtgtctg tctaatccctgctttgctggaactacgtgtaccagctcacctgatggttcctggaagtgt ggtgcctgtcctgctggctaccatggtgatggtatccactgtgaagatattgatgagtgc aaagaggttcctgatgcctgcttccacttcaatggagtgcacaggtgtgagaatactgaa cctgggtacaactgtctaccttgtccaccacgtttcactgggacacagccatttggtcgt agtgttgaggatgcaatggctaacaaacaggtctgcaaaccaaggaacccatgcacagat ggaacacatgattgcaacaagaatgccaaatgtaactaccttggccacttcagtgaccca atgtatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagac actgacttggatggatggccaaatgagaatcttgtctgtgttgctaatgccacttaccac tgtaaaaaagataactgccctaatctccccaactctgggcaggaagactatgataaagat gggattggtgatgcttgtgacaatgatgatgatgacgatggtattcctgatgaccgggac aactgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgac cgttgtgataactgcccctacaatcacaaccctgatcagattgacactgataacaatgga gagggagatgcatgtgcagtggatattgatggagatggggtcctcaatgaaagggacaat tgccagtatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcag tgtgataactgtccactggaacataatcctgaccaggaagacactgattctgaccgcata ggtgacgagtgcgacaacaaccaggacatagatgaagatggccatcaaaataatcttgat aactgtccctatgtgcccaatgccaatcaagctgatcatgacaaggatggaaaaggtgat gcctgtgaccatgatgatgacaatgatggtattcctgatgacaaagataactgcagactg gttgccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagat gactttgaccaagacagtgtgccagacattgatgacatctgccctgaaaatgtggacatc agtgagactgacttccgaaggtttcagatgattcccctggatcccaaagggacatcccaa aatgatccaaactgggttgtgcgtcaccagggtaaagagctggttcaaacagtcaactgt gaccctggccttgcagtcggttttgatgaattcaatgctgtggacttcagtggcaccttc ttcatcaatacagaaagggatgatgactatgctggctttgtatttggctaccaatctagc agtcgtttctatgttgtcatgtggaagcagatcacacagtcttactgggactccacacca accaaagctcagggctactcgggtctctccatcaaagtagtgaattctaccacaggtcca ggagaacaccttcgtaatgctctgtggcatacaggaaacactcctggccaggtaagaact ctgtggcatgaccctcgtcacataggctggaaagacttcactgcatacagatggcgcctt agccatagaccaaagactggctatatcagagttgtaatgtatgaagggaagaaaatcatg gcagactcaggaccaatttatgacaaaacttatgctggtggtcggctaggattatttgtc ttctctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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