KEGG   Aythya fuligula (tufted duck): 116489983
Entry
116489983         CDS       T07966                                 
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
  KO
K16857  thrombospondin 1
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful04115  p53 signaling pathway
aful04145  Phagosome
aful04148  Efferocytosis
aful04350  TGF-beta signaling pathway
aful04510  Focal adhesion
aful04512  ECM-receptor interaction
aful04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aful00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    116489983 (THBS1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116489983 (THBS1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116489983 (THBS1)
   04148 Efferocytosis
    116489983 (THBS1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    116489983 (THBS1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116489983 (THBS1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116489983 (THBS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aful04131]
    116489983 (THBS1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:aful00536]
    116489983 (THBS1)
Membrane trafficking [BR:aful04131]
 Endocytosis
  Phagocytosis
   Opsonins
    116489983 (THBS1)
Glycosaminoglycan binding proteins [BR:aful00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116489983 (THBS1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS cEGF TSP1_CCN Laminin_G_3 EGF Laminin_G_2
Other DBs
NCBI-GeneID: 116489983
NCBI-ProteinID: XP_032044685
UniProt: A0A6J3D2T0
LinkDB
Position
5:complement(38507936..38523083)
AA seq 1178 aa
MGPAALLVLVLLLLRGGSEARRTAESRGDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGP
ESSSPAYRIEDASRIPAVPDAKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLAVEQKDG
SGHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCE
KMENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGC
SSSTSAIITLDNPMNGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTT
LQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVS
CPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNR
CEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLNGK
PCEGEARETKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCV
GEAKGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGIHCEDIDEC
KEVPDACFHFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTD
GTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYH
CKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGD
RCDNCPYNHNPDQIDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQ
CDNCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD
ACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDI
SETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTF
FINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGP
GEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIM
ADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq 3537 nt   +upstreamnt  +downstreamnt
atggggccggcggcgctcctcgtcctcgttctcctcctcctgcgcggcggctcggaggcc
cggcgcacggcagagtccaggggtgatgataacagcgtcttcgatctctttgagctcatt
ggctttattcgcaagggagctgggcgccgggcgcccggggtgcacctggtgaagggacca
gagtcctccagccccgcttaccgtatcgaagatgccagtcgcatccctgctgtccctgac
gccaagttccaagacttgttagatgccatccatgccgagaagggcttcatccttctggcc
actctccggcaagccaagaaaagcagaggcacgctgttggctgtggaacagaaggatggc
tctggtcatgtcttcagcctagtttcaaacggcaaggcaggcaccctggacctgagcctc
tccggtgatggcaagcagcagttggtgtctgtagaggatgccttgctggctacgggacac
tggaagaacatcaccctgtttgtgcaggaagacagggctcagctttatgtagggtgtgag
aaaatggaaaatgctgaactggacattcccatccaaaacatcttcacaagggacctggcc
agcagtgccagactccgtatcgccaaagggggagtcaatgacaacttccagggactgctg
cagaatgtgcggtttgtctttggaacaactctggaaactatcctgaggaacaaaggctgc
tccagctccactagtgcaatcattactttggacaaccccatgaatggttccagcccagct
atccgcactaattacattggccataaaacaaaggacatccaagctgtctgtggcttttcc
tgtgatgaactaaccaatatgtttgtggaactgcaagggttacggtccatggttacaaca
cttcaagacagagttcgcaaagtgactgaagaaaatgagctgattgccaaagtggtccag
attactcctggagtatgcattcataatgggatcttgcacaaaaataaggaagagtggact
attgacagctgtactgaatgtacttgccagaactctgccactatatgccgcaaagtgtct
tgccctctcatgccttgttccaatgccactgtgcctgacggggaatgctgcccccgatgc
tggcctagcgactatgcagatgatggatggtctccttggtctgaatggacttcatgttcg
gtgacctgtggcaatgggattcagcagagagggcgttcctgtgacagtctcaataaccgc
tgtgaagggtcttctgtacagactcggacttgccaccttcaggagtgtgataagagattt
aaacaggatggtggctggagccactggtcaccatggtcgtcatgttctgtcacttgtggc
acgggcatgatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaa
ccttgtgagggtgaggcaagagaaaccaagtcctgccagaaagatccttgcccaattaac
ggcaactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggactt
caaaaacgcagccgtctctgcaataatcctgagcctcagtatggtgggaagacctgcgta
ggtgaggctaaaggaactcaggtctgcaacaaacaggactgtccaattgatgggtgtctg
tctaatccctgctttgctggaactacgtgtaccagctcacctgatggttcctggaagtgt
ggtgcctgtcctgctggctaccatggtgatggtatccactgtgaagatattgatgagtgc
aaagaggttcctgatgcctgcttccacttcaatggagtgcacaggtgtgagaatactgaa
cctgggtacaactgtctaccttgtccaccacgtttcactgggacacagccatttggtcgt
agtgttgaggatgcaatggctaacaaacaggtctgcaaaccaaggaacccatgcacagat
ggaacacatgattgcaacaagaatgccaaatgtaactaccttggccacttcagtgaccca
atgtatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagac
actgacttggatggatggccaaatgagaatcttgtctgtgttgctaatgccacttaccac
tgtaaaaaagataactgccctaatctccccaactctgggcaggaagactatgataaagat
gggattggtgatgcttgtgacaatgatgatgatgacgatggtattcctgatgaccgggac
aactgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgac
cgttgtgataactgcccctacaatcacaaccctgatcagattgacactgataacaatgga
gagggagatgcatgtgcagtggatattgatggagatggggtcctcaatgaaagggacaat
tgccagtatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcag
tgtgataactgtccactggaacataatcctgaccaggaagacactgattctgaccgcata
ggtgacgagtgcgacaacaaccaggacatagatgaagatggccatcaaaataatcttgat
aactgtccctatgtgcccaatgccaatcaagctgatcatgacaaggatggaaaaggtgat
gcctgtgaccatgatgatgacaatgatggtattcctgatgacaaagataactgcagactg
gttgccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagat
gactttgaccaagacagtgtgccagacattgatgacatctgccctgaaaatgtggacatc
agtgagactgacttccgaaggtttcagatgattcccctggatcccaaagggacatcccaa
aatgatccaaactgggttgtgcgtcaccagggtaaagagctggttcaaacagtcaactgt
gaccctggccttgcagtcggttttgatgaattcaatgctgtggacttcagtggcaccttc
ttcatcaatacagaaagggatgatgactatgctggctttgtatttggctaccaatctagc
agtcgtttctatgttgtcatgtggaagcagatcacacagtcttactgggactccacacca
accaaagctcagggctactcgggtctctccatcaaagtagtgaattctaccacaggtcca
ggagaacaccttcgtaatgctctgtggcatacaggaaacactcctggccaggtaagaact
ctgtggcatgaccctcgtcacataggctggaaagacttcactgcatacagatggcgcctt
agccatagaccaaagactggctatatcagagttgtaatgtatgaagggaagaaaatcatg
gcagactcaggaccaatttatgacaaaacttatgctggtggtcggctaggattatttgtc
ttctctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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