Aythya fuligula (tufted duck): 116492949
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Entry
116492949 CDS
T07966
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aful03037
]
116492949 (IFT122)
Cilium and associated proteins [BR:
aful03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
116492949 (IFT122)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WDR55
TPR_GEMI5
Beta-prop_TEP1_2nd
TPR_IF140-IFT172
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
TPR_7
WD40_MABP1-WDR62_1st
eIF2A
WDR90_beta-prop_4th
B-prop_COPA_B_2nd
TPR_COPA_B
Beta-prop_WDR75_1st
Beta-prop_IFT140_2nd
Beta-prop_SPT8
Zf_2nd_IFT121
TPR_2
Motif
Other DBs
NCBI-GeneID:
116492949
NCBI-ProteinID:
XP_032049864
UniProt:
A0A6J3DH63
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All DBs
Position
10:21682145..21714569
Genome browser
AA seq
1183 aa
AA seq
DB search
MRAALTWRDQAEHCIYDLAFKPDGTQLIVAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSSDFGLWS
PEQKSVSKHKASSKITCCSWTNDGQYLALGMFNGIVSIRNKNGEEKVKIERTGGVSSPIW
SICWNPSRDERNDTLAVADWGQKLSFYQLSGKQIGKDRVLNFDPCCVSYFTKGEYILLGG
SDKQVSLFTKDGVRLGTIGEQSSWVWTCKAKPDSNYVAVGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDS
SDMYYRVKEKIVKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVI
GGPPGREGLLVGLKNGQILKIFVDNVFAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDADWKELAMEALEGLEF
ETAKKAFTRIRDLRYLELISSIEERKKHGENVNELFLADVYAYQGKFHEAAKLYKKSGHE
NLALDMYSDLRMFDYAKDFLRSGDPKDTKMLIKKQADWAKNINEPKAAVEMYLSAGEHMK
AIEISGDHGWVDTLIEVARKLDKAEREPLLKCAFYFKKLDNPGYAAETYMKVGDLKALVQ
LYVETLRWEEAFALSEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVRVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDIAQENEQQKTEMLQKFHHFQHLAEVYHVYHYI
QRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLFALAKQSKALGAYKLARHA
YDKLQGLQIPARFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRLNKRENKWQEMMSDNAQSLRL
DDNADIIEDDPFTAKLSFEQGGSEFVPVVVNRAVLQSLSRRDVLIKRWPKPLRWQYYRSL
LPDASITMCPSCFQMFHTEDYELLVLQHNCCPFCRRRIDESNQ
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgcgctgacctggcgcgaccaggcggagcactgcatttatgacctggccttc
aagcccgacggcactcagctgatagtcgctgctgggaacaggctcctggtatatgatact
tctgatggaaccttaattcaacctttgaaaggtcataaggacacagtatactgtgtggct
tatgctaaagatggcaaacgttttgcgtctggctcagctgataaaagtgtgataatttgg
acttcaaagttggaaggaattctgaaatacacgcataatgactctatacagtgcgtttca
tacaatcctcttactcatcagttggcatcctgctcttccagtgattttggtttgtggtct
cctgaacagaagtcagtctctaaacataaagctagcagtaagattacttgctgtagctgg
acaaatgatggccagtaccttgctttggggatgttcaatggcattgtcagcatacggaat
aaaaatggtgaagagaaagttaaaatagagcgtacagggggcgtttcatctccaatatgg
tcaatttgttggaatccatccagagatgaacgcaatgatactttagctgtagccgattgg
ggtcaaaagctttccttttatcaacttagtggcaaacagattgggaaggacagagtgctc
aattttgacccttgctgtgtcagctattttactaagggagagtatattttattgggaggt
tccgataaacaagtttcactcttcacgaaggatggtgtgcgtcttggaaccataggagag
caaagtagctgggtgtggacgtgcaaagctaaaccagactccaactatgtggcagtaggg
tgccaggatggaacaatatccttttatcagttgattttcagcactgttcatggactttat
aaagatcgctatgcttacagagacagcatgactgatgttattgtccaacacctcatcact
gaacaaaaagttagaataaaaggcagagagcttgtaaagaaaattgcaatctacaaaaac
agattagccatccagatgccagagaaaatcttgatttatgagctatactcagatgattct
tcagatatgtattatcgggtgaaggaaaaaatagtaaagaaatttgaatgcaacttgctg
gttgtatgttcagatcacataattttatgccaggagaaaagattgcagtgcctctcattt
agtggcgttaaagaacgggaatggctgatggaatctcttattcgttacattaaagtaatt
ggaggacctccaggaagagaaggcctcttagttggtctaaagaatggtcagattctgaag
atatttgttgataatgtctttgcgatcgtcctgttgaagcaatccacagctgtgcgctgt
ctggatatgagtgcatctcgaaacaagctcgcagtggttgatgaaaatgatacctgccta
gtgtatgatattcataccaaagagttgctgtttcaggaacccaacgctaacagtgtggca
tggaatacacagtgtgaggatatgctttgcttttctggagggggttacctcaatatcaaa
gctagcaacttccctgtccatcaacaaaaacttcaaggctttgttgtgggttacaacggc
tccaagatcttctgtcttcatgttttttctatgtcagctgttgaagttccgcagtctgcg
cccatgtatcaatatctggaacggaaaatgtttaaagaagcatatcaaattgcatgttta
ggagtgactgatgctgactggaaagaactggccatggaagccttagaaggactggagttt
gaaacagctaaaaaggcatttaccagaataagagaccttagatatctagaattgatcagc
agtattgaggagcggaagaagcatggagaaaatgtcaatgaactgttcctagcagatgtt
tatgcctaccagggaaaattccacgaggcagcaaagctgtacaaaaagagtgggcatgag
aacctagctctggatatgtactctgatttacgcatgtttgactatgcgaaggattttctc
aggtctggagatcccaaagacacaaagatgctaataaaaaagcaagcagattgggccaag
aatatcaatgagccaaaagcagcagtggagatgtacctttctgcaggcgagcacatgaaa
gccatagaaatcagcggggaccatggctgggttgatacgttaatagaagttgctcggaaa
ctggataaagctgagcgtgagcctttgttaaaatgtgccttctattttaagaaacttgat
aaccctggctatgcagcagaaacatacatgaaggttggtgacctgaaagcattggtccaa
ctctacgtggagactcttcgctgggaagaagcatttgctttgagtgaaaagcatcctgaa
ttcaaagatgatgtctatgtcccttatgctcagtggctagcagagaatgatagatttgaa
gaagcccaaaaagcattccacaaggctggcaggcagagtgaagctgttagagtgctggag
cagctaacacacaatgctgtggttgaaagccgatttaatgatgcagcctattattattgg
atgctttccatgcagtgtttagatatagcccaagagaatgaacaacagaagactgaaatg
ttacagaagtttcatcacttccagcatttggcagaagtttaccatgtctatcactatatt
caaagatacacggaggagcctttcagtttccacttgcccgaaacactcttcaatatttcc
aggtttctgcttcacagcttaacaaaggagactcctttggggatctcaaaagttaataca
ttatttgccctggcaaaacagagtaaagctcttggtgcatataaactggctcgtcatgcc
tatgacaagttacagggactgcagattccagctaggttccagaaatcaattgagttgggc
agcctgacaatccgatccaagccatttcatgacagtgaagagcttgtacccttgtgttac
aggtgctctaccaacaaccctttgctaaataacttggggaatgtctgcattaattgcaga
caacctttcgtcttctccgcgtcctcctatgaagtgctgcatctggttgagttctatttg
gaagacggcatcacagatgaagaagctgtagctctcattgatcttgaagctccaagattg
aataagagagagaataaatggcaagagatgatgagtgacaatgcacagagtttgaggctt
gatgacaatgcagacattattgaagatgatccctttacagcaaaactgagctttgagcaa
ggaggctcagaatttgttccagtggttgtgaatcgtgctgttctccagtcactgagtcgg
agggacgttctgattaaacgctggccaaagccattgcgatggcagtactaccgttccctg
ctaccagatgcctccattaccatgtgtccatcgtgttttcagatgttccacacagaagac
tatgagcttctcgtgctccagcataactgttgtcccttctgtcgaaggagaatagatgag
tcaaaccaatga
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