Aythya fuligula (tufted duck): 116496547
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Entry
116496547 CDS
T07966
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful00514
Other types of O-glycan biosynthesis
aful04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116496547 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116496547 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
aful01003
]
116496547 (RFNG)
Enzymes [BR:
aful01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
116496547 (RFNG)
Glycosyltransferases [BR:
aful01003
]
Glycan extension
O-Glycan
116496547 (RFNG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF1180
Motif
Other DBs
NCBI-GeneID:
116496547
NCBI-ProteinID:
XP_032055616
UniProt:
A0A6J3DW61
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Position
18:complement(12782220..12789371)
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AA seq
388 aa
AA seq
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MSSSWLGLRRACVLLSVTAAAVLLLLLPRGQPPAAPRRRPPPAAAGPSGPPPKRAGSGAA
QPAGSDVPGARAGSRGERGGGGPGTGAGGRGGGLGGTAQPARQGRLGPSSGSAKESLELK
DIFIAVKTTRKYHRTRLDLLFQTWISQARGQTFIFTDWEDQELRLKAGDHMINTNCSAVH
TRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNPRTLLRLLSAFSHSQDVYVGRPSLDH
PIEAADHVQSDGSKTSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDC
TIGYIIEGLLEVKLLHSPLFHSHLENLQRLRGESVLQQVTLSYGDPENKHNVVSVGGVFG
LQQDPTRFKSVHCLLYPDTIWCPTKKMF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcctggctggggctccgcagggcctgcgtcctgctctccgtcaccgccgcc
gccgtcctcctcctgctgctgccccggggacagccccccgcggcgccccgccgccgcccg
ccgcccgccgccgccggtcccagcgggcccccgccgaagcgggcgggctccggcgcggcg
cagcccgcgggcagcgacgtgcccggcgctcgggcgggctcgcgcggggagcggggcggc
ggcggcccggggaccggggcgggcggccggggcgggggcctcggcggcaccgcgcagccc
gcgcggcagggccgcctcgggccttccagtggctcggccaaggagagcctggagctgaag
gacatctttatcgcggtgaagacgacgaggaagtatcacagaacgcgcctggacttgctt
ttccaaacttggatctcccaggcgaggggacagacatttatattcacagactgggaggat
caggagctacgcctgaaagcaggggatcatatgatcaacaccaactgttcagctgtccac
acgcggcaagctctctgttgcaagatgtctgtggaatatgataaattcctagaatctggg
caaaaatggttttgccatgtggacgatgacaactatgtgaacccacggacactcctgcgt
ctcttatctgccttctcacacagccaggatgtctatgtggggcgaccaagtctggaccat
cccattgaggcagctgaccatgtccaaagtgatggatcaaagacaagcgtgaaattctgg
tttgccacaggtggagcagggttctgtatcagcagaggtcttgctctgaagatgagtccc
tgggccagcctgggtaacttcatcagtactgcagaaagagtgcgtctgcctgatgattgc
acaattggctacatcattgaagggctgctggaggtaaagttgctgcacagcccgttgttc
cattcccatctggaaaatctgcagaggctgcgaggcgagtctgtgctgcaacaggtaacc
ctaagttatggagaccctgagaacaaacacaacgttgtgagtgtgggaggagtgtttggg
cttcagcaagatccaacccgatttaaatctgtccattgtcttctgtatcctgacactatc
tggtgccctactaagaagatgttctaa
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