KEGG   Aythya fuligula (tufted duck): 116497506
Entry
116497506         CDS       T07966                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful04115  p53 signaling pathway
aful04210  Apoptosis
aful05164  Influenza A
aful05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:aful00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    116497506 (APAF1)
   04115 p53 signaling pathway
    116497506 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    116497506 (APAF1)
   05168 Herpes simplex virus 1 infection
    116497506 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 NB-ARC APAF1_C WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 APAF-1-like_WHD WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st CARD Beta-prop_TEP1_C Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N CARD_2 Beta-prop_SCAP WD40_like eIF2A Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_DCAF12 AAA_16 AAA_22 DUF2415 Dark_WHD LRRC37
Other DBs
NCBI-GeneID: 116497506
NCBI-ProteinID: XP_032057166
UniProt: A0A6J3E0P4
LinkDB
Position
1:complement(45947439..45981024)
AA seq 1248 aa
MDVKSRNYLLMNRQALERDIKTSYIMDHMVADQVLTLQEEEKVKQQITQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPVFSSGNGKSSVDGMTSYVKTVLCEGGVP
QRPVVFVTRPELVDAIKQKLCSLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVSGNKYEIHVESGLAHEKGLEVLSLFVN
MKISELPEQANCIIRECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLDNDFKDYYKDLSILPKDVKVPTKVFCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKHYKLNMPIPSQEDC
MYWYNFLAYHMAGANMQKELRELMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSIV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPDTSEVYQQAKLRAQSEIGAFYLEWINKKS
LKNLSRLVVRPHKDAVYHACFSQDRQRIASCGADKTLQVFKTESGEMLLEITAHEDEILC
CAFSADDKYVATCSADKKVKIWNSRTGKCMHIFEEHTEQVNCCQFNNRSGQYLLATCSND
TFIKLWDLKGKYCRNTMFGHVNSVNHCRFSPNDEYVASCSTDGTVKLWEARSANELKTIE
IKDLFQNADEQDDVEVLVKCCSWSRNSDMILAVAKNKLLLFDVKTSDLLTQVIVSHHSTI
QYCDFCAGDELVAVALSHCSVELWNIKSLSKVADCRGHMSWVHCVTFSPDGSLFLTSSDD
QTIRIWETNKVCKSSDAELKSELDAVFHNGEVMILAIYNQKHIQLINGNTDNIIMQTEPQ
ESLICCCCLSEDLKFAAVGQENGTVKVLQLLDGKVLKCREAYRTSVQHCRFTSDCQTLIS
SAHDAVIQVWNWQLNECVFLRGHKEAIKDFRLLENSKLLSWSFDGTVKVWNIITGKTEKD
FACHGGAVLSCAVSPDGSKFSSTSADKTAKIWNFESSCVLHELKGHEACVRCCTFSPNNK
LLATGDDKGDIRIWDILTGGLLHFCSLVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGYL
KWWNVTTGESLQTFYTNGTNLKSIHVSPDFKVYVTVDNLGILYVLQKL
NT seq 3747 nt   +upstreamnt  +downstreamnt
atggatgtgaagagtagaaattatttacttatgaatcgtcaagctctggagagagacatc
aagacctcttatattatggatcatatggtagctgatcaagtactaacattacaggaggaa
gagaaagtgaaacaacagatcacacagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgcttcatgaagggtac
agagatcttgctgcacttcttcaggatggcattcctgtcttctcctctggtaatggaaag
agttctgtggatggaatgacttcttacgttaagacagttctctgtgaaggaggagtacca
caaagaccggttgtgtttgtcactcggccagaactggtagatgctattaaacagaaactg
tgcagcttgggaagtgatccaggctgggtcacggtttacggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatcaccagctcttggaagattactttccagga
ggagttcactggatctctgttggaaaacaggacaaagcagggctccttataaaactacaa
aatctgtgtagtagattagaacacgactctactctttcacagagaccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctaatgctgcgcaaatatcccaggtctcttttg
gtcctggatgatatttgggattcctgggtattaaaagcatttgataatcaatgtcaagtt
cttattaccagccgggacaggagtgtaacagatgctgtgtctggcaataaatacgagatt
catgtagaaagtggacttgcacatgagaaaggactggaggttttatccctgtttgtgaat
atgaaaatatcagaactgccagaacaagctaactgcattataagagaatgcaaaggttct
cctcttgtgatatcattgataggcgcattattgcgagacttccccagtcgctgggagtac
tatctcaaacagctgcagaacaagcaatttaaaagaataagaaaatcttcgtcttatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaactggataatgattttaaa
gactactataaagacctctctattcttccaaaagatgttaaagtacctactaaggtgttc
tgtattctttgggatatggaaaccgaagaagtcgaagatatactgcaggaatttgttaac
aaatcactattgttctgtgatcgtaatgggaagtcatttcactattatttacatgatctt
caacttgactttcttacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtcaatcagtacaagaaacattacaagcttaacatgcctattccatctcaagaggattgc
atgtactggtataacttcctagcatatcacatggctggtgccaacatgcagaaggaactc
cgtgagcttatgttttctctagattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtggaatatagttcagtcctggatcaaaaggatagcatagta
cgtgagaatttccaggaatttctgtctttaaatgggcaccttcttgggcgacagccattt
cctgacattatacagctgggtctttgtcaaccagacacatcagaggtgtatcaacaagcc
aagctacgtgctcagagtgaaataggagcattttatttggaatggataaataaaaaatcc
ttgaaaaacctctcccgtctggttgttcgtccacataaagatgcggtttaccatgcctgc
ttttctcaggacaggcaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaaacagaaagtggagagatgctgctggaaataactgctcatgaagatgaaatactctgt
tgtgcgttctctgcagatgataagtatgtagcaacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggcaagtgtatgcacatatttgaagaacacacagagcaggtc
aattgctgccagttcaataacagaagtggtcagtatcttttagccacgtgctcaaatgat
actttcatcaaactttgggatctgaagggaaagtattgtagaaatacgatgtttggtcat
gtaaattctgtcaatcactgtagattttcgccaaatgatgaatatgttgccagctgctca
acagatggaacagtaaagctttgggaagcacgctcagcaaatgaactgaaaactattgag
ataaaagatctcttccaaaatgcagatgagcaagatgatgtggaggtcttagtaaaatgt
tgctcttggtccagaaatagtgacatgattttggccgttgccaaaaataaactcttgctt
tttgatgttaaaacaagtgatttgttaacgcaagtcattgtaagtcatcacagtacaatc
caatattgtgacttctgtgctggtgatgagttagtagcagttgctttgtctcattgttct
gttgagttatggaatattaaatccttatcaaaagtagcagattgcaggggacacatgagc
tgggttcactgtgtgacattttccccagatggatctctgtttctgacatcctctgatgac
cagacaatacgaatttgggaaacaaacaaggtgtgcaagtcttctgatgctgagctaaaa
agtgaactagatgctgtatttcacaacggtgaagtaatgattttagcaatttacaatcag
aagcatatacaactcattaatggaaatacagacaacattattatgcagacagaacctcag
gaatcccttatttgctgctgttgcttaagtgaagatctaaaatttgcagcagttggacag
gagaatggaacagtaaaggtattgcagttgttggatgggaaagttctgaaatgccgggag
gcctacaggacatccgtgcagcattgtcgatttacctctgattgtcagactctgatttca
agtgctcatgatgcagtcatacaggtatggaattggcagttgaatgaatgtgtgtttcta
agagggcacaaggaagctatcaaggactttagacttctggaaaattcaaaacttctttct
tggtcatttgatggaacagttaaggtttggaatatcatcactggaaagacagaaaaagat
tttgcttgccatggaggtgctgttctttcctgtgctgtttcacctgatggtagtaagttt
tcatctacttctgctgacaaaactgcaaagatatggaactttgaaagttcatgtgttctt
catgagctgaaaggtcatgaagcctgtgtgcggtgctgtactttctctcctaataacaaa
ttactagccactggggatgacaaaggagatataaggatttgggacattttaacaggtgga
ttacttcacttctgctccctagttactgtagatgaaggagaaccaacacacggtggctgg
gtaactgacctctcattttctcctgacagtaagatgcttgtgtcatctggaggctatctt
aagtggtggaatgtaactactggagaatccttgcaaacgttctacacaaatggaactaac
cttaagtcaatacatgtgtcccctgatttcaaagtgtacgtgactgttgataatcttggt
attctgtatgtattacagaaattgtga

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