Aythya fuligula (tufted duck): 116497985
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Entry
116497985 CDS
T07966
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116497985 (KDM1A)
Enzymes [BR:
aful01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
116497985 (KDM1A)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
116497985 (KDM1A)
REST complex
116497985 (KDM1A)
Histone demethylases
116497985 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
FAD_binding_2
HI0933_like
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
MurD-like_N
Sec10_N
GIDA
Lycopene_cycl
AgI_II_C2
IlvN
Motif
Other DBs
NCBI-GeneID:
116497985
NCBI-ProteinID:
XP_032057989
UniProt:
A0A6J3E4D6
LinkDB
All DBs
Position
23:106069..158775
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AA seq
851 aa
AA seq
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MLSGGKKAAEAAGAGGEGGPEAPVPPSGAAGALGSSAEGGGTAERTPRKKEPPRASPPGG
LSEPPAAGAAPAPGAETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEER
NAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDNSGGYGDGQASGVEGAAFQS
RLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAP
YNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFG
MDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCP
LYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEK
HVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVK
SKHRDLTALCKEYDELSETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANA
TPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCE
VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNK
VVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDD
VIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPIT
PGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPT
PGVPTQQATSI
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccggggggaagaaggccgcggaggcggcgggggccggcggcgagggcgggccc
gaggcgccggtgcctccgtccggtgccgcgggagcgctgggctcctccgccgagggcggc
gggacggcggagcgcactcctcgcaagaaggagccgccgcgggcctcgcccccgggcggt
ctgtccgagccgcccgccgccggcgccgccccggcgcccggcgctgaaaccaccggcatc
gccgagaccccggagggtcgcaggaccagccgccgcaagcgggccaaagtggagtataga
gaaatggatgaaagtcttgcaaacctatcagaagatgagtattattctgaagaagagaga
aatgctaaagctgagaaagagaaaaagctgccaccaccaccaccaccagctcctgcagaa
gaagagaatgaaagtgagccagaagagccatctgggcaagcaggaggacttcaagacgac
aattctggagggtatggagacggccaagcatcaggtgtggagggcgcagctttccagagt
agacttccacatgaccgtatgacatctcaagaagcagcctgcttccctgatataatcagt
gggccacagcagacacagaaggtgtttctgtacatcaggaaccgcacccttcagctctgg
ttggataacccaaagatccaattgacatttgaggcaactatccaacaactagaagcacct
tataatagtgatacggtgctagttcacagagtacacagctatctggagcggcatggacta
atcaactttggtatctacaaaagagtgaagccccttccaaccaagaagacaggaaaggtg
atcattattggttctggagtctcggggttggcagcagctcgccagttgcagagtttcggg
atggatgtcacagttctggaagccagggaccgagtaggaggaagagttgctacgtttcgc
aaagggaactatgtagctgatctaggagcaatggtggtaacaggacttggaggaaatccc
atggctgtagtcagcaaacaagtgaatatggaattggctaagatcaaacaaaaatgccca
ctttatgaagcaaatggacaagccgttccaaaagagaaagatgaaatggtggagcaagaa
ttcaatcgtctgttggaagccacctcttatctcagtcatcagcttgattttaatgttctc
aataataagcctgtctccctaggtcaggctctggaggttgtcatacaattgcaggagaaa
catgtgaaagatgaacagattgaacactggaaaaaaattgtgaaaacacaggaggaattg
aaagaccttcttaacaagatggtgaatttaaaagagaagattaaagaactccatcagcag
tataaagaagcatcagaagtgaagccacctcgggatattacagcagagttccttgtgaaa
agtaaacacagagatctgactgcgctttgcaaggagtatgatgaattgtcagaaacacaa
ggaaagctggaagagaagctacaagaacttgaagccaatccaccaagtgatgtctatctg
tcttcaagagacaggcaaatacttgactggcattttgcaaacctagaatttgctaatgct
acgcccctctctacactttcactgaagcactgggaccaggatgatgactttgaattcaca
ggcagtcacttgactgtgaggaatggatattcctgtgtgcctgtagccttagcagaaggg
ttggatattaaattaaacacagcggttcgacaggttcgctatacagcttcaggctgtgaa
gtgatagctgtaaatacccgatctactagccagacgttcatttataaatgtgatgccgtg
ctatgcactcttcccttgggagtattgaaacagcagcctccggcagtacagtttgtgcca
cctcttcctgagtggaaaacttctgcagtgcagcgtatgggatttggcaacctcaacaag
gttgtgttgtgttttgaccgtgtcttctgggatccaagtgtcaatttgtttggtcatgtt
ggtagcaccaccgcaagtagaggagaacttttcctgttttggaacctgtacaaagcgcca
attttattggccttagtagcaggagaagctgcagggattatggaaaatatcagcgatgat
gtcattgttggacggtgtcttgccatcctcaaaggcatatttggcagcagcgctgtgcca
cagcccaaagagactgtggtgtcccgttggcgtgctgacccgtgggcccggggatcatac
tcgtatgtagcagctggatcttctggaaatgactatgacttgatggctcagccgattact
ccaggaccagccattccaggtgctcctcagcctattcctcgcctgttttttgcgggagag
cataccattcgcaactaccctgccactgttcatggtgctttactgagtggactgagagaa
gcaggtcgcattgcagaccagtttcttggggccatgtatactttgcctcgccagcctaca
cctggggtccccacacaacaagctaccagcatataa
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