Aythya fuligula (tufted duck): 116498420
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Entry
116498420 CDS
T07966
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aful04040
]
116498420 (SCN4A)
Ion channels [BR:
aful04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116498420 (SCN4A)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
116498420
NCBI-ProteinID:
XP_032058577
UniProt:
A0A6J3E9L4
LinkDB
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Position
24:complement(5918282..5951515)
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AA seq
1837 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPESLAAIEQRIAEAEALKIKRQQVELPEEEELKPSSDLEAGKN
LPLIYGDPPVELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPLNDTLLGDFGLDNDTLAN
ATLYSNFTDSIDSNFTSNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPEGYEC
MKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGS
FYLINLILAVVAMAYAEQNDATMLEAQQKEEEFQQLMEQLKKHQEEQEKQLQDRRSSSGS
LHSSTAEKKSDSDLNSDQDKAKDCNGRVVPKVVLERSATVIEFNPGNETEKSDYNHLTVG
NQDGPGLEKRVGSAISVISNTMEELEEAHQKCPPWWYKFAHTFLIWDCCLPWLKLKEFVK
LVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIAL
DPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKI
IGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCTLPRWHMHDFFHSFL
IVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSLAA
SDDDGEMNNLQIAIGRITRGIDFVKSSVLMLLRRLWKGKKVAPEEEQEPSKGDNSALNHV
DTGQEPKSEYMDGVTGKEYLFMDELDHMNFINNPNLTVQVPIASEESDLYEEETSTQSDT
EDATNPLSSDNASSLCSTVDYKPPPPEEEAVAEEAEDSNEPEECFTEACVKRFPCLYVDI
TSERGKVWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYAD
KVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIVSLTANWLGYSELGAIKSLR
TLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRC
VNTTSGELFEISVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSREIEEQPSYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLNMVT
MMVETDDQSELKTDILYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVILSIA
GIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPILNSG
PPDCDPELENPGSSVKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATEESS
EPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDLPMV
AGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKHEEV
CATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALRGDAPEKEGLIATKMHEMYGNSGTDV
ETAPAFSLAPVPSSETQDAPGEVKVWDGKRIVKESLV
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctccgccccttcacccccgagtcg
ctggctgccatcgagcagcgcatcgccgaggcagaggcgctcaagataaagcggcagcag
gtggagctgcccgaggaagaggagctcaagcccagcagtgacctggaagctggcaagaac
ctgcccctcatctatggtgacccccccgtggagctcatcgggacacccctggaggacctg
gaccctttctacaaggataagaagactttcatagtcctcaacaaagggaagtccatcttc
cgcttctcggcgactcctgccctctacctgctgggtcctttccaccccatccggagagga
gccatcaaagtgctcatccattcattattcagcatgttcatcatgatcacaattttaacc
aactgcgtgtttatgacattgagcaacccaccggcgtggtccaagaatgtggaatacacc
ttcactggaatttacacctttgagtccctcatcaagatactgtcgagaggcttctgcatt
gatgactttacattcctgcgtgacccatggaattggctggacttcatggtcatctccatg
gcctacatcactgagtttgtggacctggggaacatatctgctctcaggaccttccgcgtc
ctccgtgccttgaaaaccatcacagtgataccagggctgaagacgatcgttggggcgctc
atccagtcagtgaagaaactctcggatgtcatgatcctcactgtcttctgcctgagtgtc
tttgccctcattggcctccagctcttcatgggaaacctccggcacaagtgtgtgcggtgg
ccccccctcaatgacaccttgctgggggacttcgggctggacaacgacacattggccaat
gcaacgctgtacagcaacttcaccgacagtattgacagcaacttcaccagcaacagcacg
tttgattttgaggcctacatcaacgatgaagcaaatttctactttctggagggagcgctc
gatgccctgctctgcgggaacagcagcgatgctgggaagtgccctgagggatacgagtgc
atgaaggcagggaggaaccccaactatggctacaccagctacgacaccttcagctgggct
ttcctggcgctgttccgcctcatgacgcaggacttctgggagaacctcttccagctgacc
ctgcgtgcagcagggaaaacatacatgatcttcttcgtggtggttatattcctgggttcc
ttctacctaatcaacctcatcctggcggtggtggccatggcctatgcggaacaaaacgac
gccacaatgctggaggcgcagcagaaggaggaggaatttcagcagctcatggagcagctg
aagaagcaccaggaggagcaagagaagcagttgcaggacaggcgatccagcagcggctcc
ctgcacagcagcacggccgagaagaagagcgactcagacctgaacagtgaccaggacaag
gcgaaggactgcaacgggcgagtggtccccaaggtggtgctggagcggtccgccacggtg
attgaattcaacccaggcaatgagacggagaaatcagactacaaccacctcactgtgggc
aaccaagatggtccaggccttgagaagagagtggggagtgccatcagcgtcatctccaac
accatggaagagctggaggaggctcaccagaagtgcccaccttggtggtacaaatttgct
cacacgttcctgatctgggactgctgccttccatggctgaagctgaaggagtttgtcaag
ctggtggtgatggacccctttgtggacctgggcatcaccatctgcatcgtgctcaacacg
ctcttcatggccatggagcactaccccatgacggaggagtttgagaacgtgctgactgtg
gggaacctggtctttacaggaatcttcacagcagaaatggtcctgaagctcattgcgttg
gacccctatgagtatttccagcagggctggaatatatttgacagcatcatcgtcaccctg
agcttggtggagctgggtctggccaacgtgcaggggctctccgtgctccgctccttccgc
ttgctgagggttttcaaactcgccaagtcctggcccaccctcaacatgctgatcaagatc
attggcaactcagtgggtgctctggggaatctcaccctggtgttggccatcatcgtcttc
atcttcgccgtggtggggatgcagctcttcgggaagagctacatggagtgcgtgtgcaag
atctccctggactgcacactgccccgctggcacatgcatgacttcttccactccttcctc
atcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatggaggtg
gccggccagaccatgtgcctcattgtcttcatgatggtcatggtcatcgggaaccttgtg
gtcctgaacctgttcttagctttgctgctgagttccttcagtgccgatagcctggcagca
tcagatgatgatggcgagatgaacaacttgcagattgctattggcagaatcaccaggggg
atcgactttgtaaagagctctgtcctcatgctgctccgcaggctgtggaaggggaagaag
gtggccccagaggaagagcaggagcccagcaagggggacaattctgcgctgaaccacgtg
gacactggccaggagcccaagtcggagtacatggacggagtcactgggaaagagtatttg
ttcatggacgaactggaccacatgaatttcattaacaaccccaacctgacggtgcaggtt
cccattgcctcggaggagtccgacctctacgaggaggagacaagcacccagtcagacacc
gaggatgccacaaaccccctctccagcgacaatgcctcgtccctgtgcagcactgtggat
tacaagccaccgccgccagaggaggaggcagtggcagaagaggctgaggacagcaatgag
cctgaggagtgcttcaccgaagcctgtgtgaagaggtttccctgcctctacgtggacatc
accagcgagagagggaaggtctggtggaacatccggaaaacctgcttccgcatcgttgag
cacgactggttcgagaccttcattgtcttcatgatcctcctcagcagtggggcactggct
tttgaggacatctacattgaacagcgacgggtgatacgcaccatcctggagtacgccgac
aaggtcttctcctacgtctttgtcatcgagatgttgctcaagtgggtggcctacggcttc
aaggtttacttcaccaacgcatggtgctggctggatttcctcatcgtcgatgtttctatt
gtcagcctgacagcaaactggctgggatactccgagctgggagccatcaagtccctgcgg
acactgagggccctgagaccactgcgcgccctgtccagatttgaagggatgcgggtggtg
gtgaatgccttgctgggtgccatcccctccatcatgaacgttctgctggtctgcctcatc
ttctggctgatattcagcatcatgggggtgaacctctttgcggggaagtactaccgatgc
gtaaacaccacctcgggggagctctttgaaatcagtgtggtgaacaataagagtgactgc
atggctctcctccacaccaacgaggtcagatgggtcaatgtcaaggtcaacttcgacaac
gtgggcttgggatacctgtccttgctgcaggtggcaaccttcaaaggctggatggacatc
atgtatgctgctgtggactcacgtgagattgaagaacagccatcgtacgagatcaacctc
tacatgtacatctacttcgtcatcttcatcatctttggtgccttttttaccctgaacctc
ttcatcggtgtcatcattgacaatttcaaccagcagaagaaaaagtttggaggcaaagac
atcttcatgacggaagagcagaagaaatactataatgccatgaagaagctcggctccaag
aaaccccagaagcccatccccaggccctcgaacaagtttcaagggatggtgtttgacttt
gttaccaagcaagtgtttgacataaccatcatgatcctgatttgtcttaacatggtgacc
atgatggtcgaaacagatgatcaaagcgagctcaaaacagacatcctctacaaaatcaac
ctggtcttcattgtcatcttcactggagaatgtgtgctaaaaatgtttgccttgcgctac
tactacttcactatcggctggaacatatttgactttgtggtggtcatcctctccattgca
ggtattgtcctctcggacatcatagagaagtacttcgtatcacccacgctcttcagggtc
atcaggctggcaaggattggtcgtgtcctccgactgatccgaggagcaaaaggtatccgg
actctcctgtttgctctgatgatgtccctgcctgccctcttcaacatcggcctcctgctg
ttcctcgtcatgttcatctactccatctttgggatgtccaacttcgcctacgtaaagaaa
gaggcagggatcgatgacatcttcaactttgaaacttttgggaacagcatcatctgcctc
ttccagatcaccacatcggcaggatgggatggtctgctcagccccatcctcaacagtggc
cctcccgactgcgaccccgaactggagaaccctggcagttcagtaaaagggaactgcggc
aatccatccatcggcatcttcttcttctgcagctacatcatcatttcctttcttattgtg
gtgaacatgtacatcgccatcatcctggagaatttcaacgtggccacggaggagagcagc
gagccgctctgtgaagatgattttgaaatgttttatgaaacgtgggagaagtttgaccca
gatgccacccagttcattgcgtacagcaccttgtctgactttgtggacaccttgcaggag
ccgctcaaaattcctaagccaaacaagatcaagctgatcaccatggatctaccgatggtt
gctggggacaaaatccactgtctggatattctctttgccctgacaaaggaagtgctggga
gactcgggagagatggatgccctgaaggccaccatggaggagaagttcatggccgcgaac
ccctcgaaggtttcctatgaacccatcaccaccactctgaaaaggaagcacgaggaagtg
tgtgctacaaaaatccagagggctttccggaggtacctcctgaggcgctcggtgaagcag
gcctcctacatgtacaggcacagtaaggatgaagacgccctgagaggggacgcacctgag
aaggaaggtctgatcgcaaccaaaatgcatgagatgtatgggaacagtgggacagacgtg
gagacagccccggcctttagccttgcacctgtgccgagctcagagactcaagatgctcct
ggtgaagtgaaagtgtgggatgggaaacgcattgtgaaggagtcgcttgtataa
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integrated database retrieval system
