Aythya fuligula (tufted duck): 116498514
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Entry
116498514 CDS
T07966
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116498514 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aful03041
]
116498514 (EFTUD2)
Spliceosome [BR:
aful03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116498514 (EFTUD2)
Complex C
U5 SnRNP specific factors
116498514 (EFTUD2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
116498514
NCBI-ProteinID:
XP_032058713
UniProt:
A0A6J3EBE4
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All DBs
Position
24:complement(5342888..5364852)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDEDDELGREAKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagttcgggaactacatcgggccggagctggactcggac
gatgaggacgacgagctgggcagggaggccaaggacctggacgagcttgaggatgatgat
gacgatgatgatatgggggaccacgatgaagaccaccctgggatggaggtggtgcttcac
gaggataagaaatactatcccactgccgaggaggtctatgggcctgaagtagagacgata
gtgcaagaggaagacacgcagcctctcactgagcctattattaaacctgtgaaaaccaaa
aagttctccttgatggaacagacgttaccggtcactgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcaccat
ggcaagacttgttttgttgactgcctgatagaacagacgcacccagaaatccggaagcgc
tacgaccaggatctttgctacaccgatatattgttcacagagcaagagaggggagtaggg
atcaagagcacaccagtgactattgttctgccagacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcatgtgaatttttccgatgaggtgacagcaggccttcgt
atctcagatggtgttgtgcttttcattgatgcagctgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggaaagactagcagtgactgtgtgcatcaacaaaata
gaccgcctgatcctggagctgaaattgccccctacagatgcctattacaaactccggcat
attgtagatgaagttaacggtctgataagcatgtattccaccgatgagaaccttgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacactg
ggatcttttgcaaagatttatgcagacacatatggagatatcaattaccaagagttcgcg
aagcgactttggggtgacatctacttcaatccaaagacacggaagttcactaaaaaggcc
ccaactagtagctcccagcgcagttttgtggagttcattcttgagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacgaccctgcctaggactctggatgaactcggc
atccacctgaccaaagaggaattgaaactgaacattcggccgctcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgcgtgcagcatattccctcc
ccaaaggtgggagccaagacgaaaatcgagcatacctacactggtggcgttgactctgat
ctaggggaagccatgagtgaatgcgaccctgacggtccgctgatgtgtcacacaacaaaa
atgtacagcacagatgatggcgttcagttccatgccttcggcagagtgctcagtggtacc
atccatgctggccagcccgtgaaggtcctaggagaaaactataccctggaagatgaggag
gattcacagatctgcactgttggacgcctctggatctcggtggcaaggtatcacattgag
gtaaaccgggttcctgctggcaactgggtgctgatagaaggagtggaccagcccatagtg
aagactgcaaccgtcacggagcctcgaggcaatgaggaggctcagatctttcgtcctttg
aaattcaacaccacgtctgtcatcaaaatagctgtagagccagtcaacccctctgagctc
cccaaaatgttagatggtcttcgcaaagtcaacaagagttacccctcgcttacaactaag
gtggaagagtcaggggaacatgtgatcctggggacaggggagctctatctggattgtgtg
atgcatgatctacggaagatgtattcggagattgatatcaaggtcgctgatccagttgtg
acgttctgcgagacagtggtggaaacgtcctccctgaagtgctttgctgagacacccaat
aagaagaacaagatcacgatgattgctgagcctctggagaagggacttgcggaggacatt
gaaaatgaagtggtccagataacgtggaacagaaagaaactgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccagatgctact
ggcccaaacatcctcgtagatgatacgctaccctcagaggtggacaaggcactgctgggc
tctgtgaaggacagcatcgtgcagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgtaatgtgaagtttaagattctggatgcagtgattgctcaggagccc
ttgcacagaggcggaggacagatcatcccaacggcacggagagtggtgtattctgctttc
ctgatggccacccctcgcctgatggagccctactacttcgtggaggtgcaggcccctgct
gactgcgtttctgcggtgtacacggtgctggcccggcggagaggccacgtgacacaggat
gctccaatcccaggttcccctctctacaccatcaaagccttcatcccagccattgattcc
tttgggttcgagacagacctgaggacccacacgcagggacaagcattctcgctgtcggtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccgaccc
ctggagccacagccagccccacatctggccagagagttcatgattaagaccaggcgcagg
aagggcttgagcgaggatgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ctggccaagcaagatgttgttctcaactaccccatgtga
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