Aythya fuligula (tufted duck): 116498528
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Entry
116498528 CDS
T07966
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03440
Homologous recombination
aful03460
Fanconi anemia pathway
aful04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116498528 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
116498528 (BRCA1)
03460 Fanconi anemia pathway
116498528 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aful01009
]
116498528 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116498528 (BRCA1)
03036 Chromosome and associated proteins [BR:
aful03036
]
116498528 (BRCA1)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116498528 (BRCA1)
Enzymes [BR:
aful01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116498528 (BRCA1)
Protein phosphatases and associated proteins [BR:
aful01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116498528 (BRCA1)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116498528 (BRCA1)
Multi subunit type E3
BRCC complex
116498528 (BRCA1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116498528 (BRCA1)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
116498528 (BRCA1)
BRCA1-A complex
116498528 (BRCA1)
BRCA1-B complex
116498528 (BRCA1)
BRCA1-C complex
116498528 (BRCA1)
BRCA complex
116498528 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
116498528 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
BRCT_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_6
BRCT_3
zf-RING_10
zf-ANAPC11
zf-MIZ
zf-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
116498528
NCBI-ProteinID:
XP_032058734
UniProt:
A0A6J3E6F2
LinkDB
All DBs
Position
24:complement(1196797..1219107)
Genome browser
AA seq
1848 aa
AA seq
DB search
MDLAVVAAGEVQNVLSAMQKNLECPICLDVVKEPVSTKCDHIFCRFCMYKLLSKKKKGVV
QCPLCKTEVTKRSLTENSRFKQLIEGLLEAIHAFELDTGVKFLNSHHLPKSSTEATAAKL
PCNESSVIQSKGFRNRKRSAKENEQENCTLQGADVDAQRADISVKRCSLRNRNQKHDLEK
GVFIELGTDSSEELCKQAGNTGLGNKEVVQISSEEKLEEPKSPEKGNEYSCNTRATELRA
KEIILPNVIGESDFSKEALSKKSTQSITEHANPDQVNEMECQSSPLNILSPDLLTERCDR
TDNASPLKDGDTSLSKNAEETGAEQTQCSNKSQEFDLEDSSENRPGKSKEIDAVVQSVED
VEMCESENDSEKESPLEKLLQPETPHCPTLHQVSRKRLKRSIQKVNEWFSKSNEILSSNS
SHDDPAEASDVSGEGDALSDKDSCISEKTSPVVGFMETTVSEGNKRWSKEKTDSIKDKIF
GKTYERERKSNPPIILREILPTTKKEDVPAVQECLNNSRKDSLKRKRKSVRHLQPEDFIK
KKDVVEAGGCPQSVNSCLGDAEKKKCEESSAGKENPPPEKRKGSTLAEFEEGASMSKNAT
EKVTCEHSGELELSNSDQKSTKNPSSAAKRCRRSTRTMCALQLVVDKNSASPDPAETLIE
SYPSSEEPRNADSEQRQVRRSRRLQLLSEEMTKETAKRVVIKEASKYDGDQEGSVSGVEK
TVLVRDSECKDLCEQQDISSCKPLTDLESADLEANAIQMSPKNSSETAETGKRLFNPAPS
HQHSDLNSSSPRAGSEEGEVLGNPLLHQSPSKTVVQTASHLPEGKRAESCPTLPQDEEHS
TQNVPEGLRTEKSPMAKNVSELAKESEDSELDTQYLRNIFRNSKRLSFSLYPAPRKACEI
DDDASEKLKMSCADQVEKRHSKYFNTENLQEEKTAENLSNVCEKEKMKNCESACASPVSC
TVSNAECACSGDCQDVSQVANQGNLMTPVRMGAASSEGKSRPQKGEQGSEETASTDAGAE
STLRQNPGKSSRSQSVQSNTEEHVFQRTDLNTVSETCFSSESDQAEKAEFVDSEGPVLCF
QPSSMACPTACQQMSAEFNCKDTEKRRSKRRRLIGDEEPATQTASTGVPECLVAETLEEP
FKGCGDCTDTSETPDGLMCSDDDSEENVSFCEAPRKDRSAVFVKSDLVKERDHGGVSSQP
QSTGIQRARRRAQKLQSSSEESSEDEDLPCFQALIFGKSASTPLQTNKQVTSSLGSSGNH
NALPRGRSHEDNVQKTPEAALSNGCASPSQESECSVNLFSSQSNVSEESAEGAQEPKKPL
LQVHASKQQSNVSESKETLQSCAGGLKRRKTNSKDECQEDPNLGEASGYDSETSHVEDSC
GPFSQGEILSTQQKNAMQNNLKKLQQEMAALEAVLQEHGSQDSEDLPAYRELLGPRSERI
LAVEQTRQRGAESTSEGSFENHKCSTSKGFSADEVHVIPSDSSNSEVKVLEIERSPELPY
PSLKSSWSKRPDLEEDLRHDSVVENKAPQETKPVQEAVQEYSQSEEENADEKPGTKLNKA
SVLNDLCGNVTRSPHASSSFVKPPHLQTAEATNTSAVAQNDNKSRSQGCKSKRSVCFPTS
VLHNASGKENATNPVVTNRKKMSIVASGLNQSEHMVVQKFARKTQSTFSNHITDGTTHVI
MKTDKELVCERTLKYFLGIAGRKWVVSYQWVVQSFKEGMILDEETFEVRGDVINGRNHQG
PKRARQSLTEKIFKDFEICCYGPFTDMTTGHLEWMVELCGASVVKQLHLFTHKMNSTAVV
VVQPDAWMEGTSYKAIQQKNNVAVVTREWVLDSVACYECQELDTYLVS
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggacctggccgtggttgccgctggagaggtgcagaatgtgctctcggctatgcagaag
aacttggagtgccccatttgtttggatgtagtgaaagagccagtttcaacaaaatgcgat
cacatattctgcaggttttgtatgtataaactcctcagcaaaaagaagaaaggtgtggta
cagtgtcctctgtgcaagactgaagttactaagagaagtctgacagaaaattccagattt
aagcagctgattgaaggactgttggaagccatccacgcatttgagcttgacactggagta
aaatttttaaacagccatcaccttcctaaatcgtccacagaagccacagctgcaaagctt
ccatgtaatgaaagttctgtcatccagagtaagggcttcagaaacaggaaaagaagtgct
aaagaaaatgaacaagaaaactgcaccttgcagggagctgacgtggatgcacagcgtgca
gacatcagtgtgaaaaggtgttccctaagaaaccgaaaccagaaacatgacttagaaaaa
ggagtatttatagagcttggcactgattcatctgaagagctttgcaaacaggcaggcaat
actgggttaggaaacaaagaagtggttcagatttcatctgaagaaaagctagaagaaccg
aagagccctgagaaggggaatgaatattcttgcaatacacgagctaccgagctgagagct
aaagaaataattctaccaaatgtcataggtgaaagtgatttctcaaaggaagccttgagc
aagaaaagcacgcagagcatcactgaacatgcaaatcctgaccaagtgaacgagatggaa
tgccagagttctcctttaaacattctttccccagacctgctcacagagaggtgtgacaga
acagataatgccagtcccttaaaggatggggacacgtctctttctaagaatgcagaagaa
acgggtgcagagcaaactcagtgcagtaataaaagccaagagtttgatttagaagatagt
tcagagaacagaccaggtaaaagcaaggaaatagatgctgttgtgcaaagtgtggaagat
gtggaaatgtgtgaatctgagaacgattctgaaaaagaatctcctctggagaagctcctt
cagccagagacaccacactgtcctacgctgcatcaggtctctaggaagagattgaaacga
agcattcagaaagtcaatgaatggttttcaaaaagcaatgagattctatcttccaattcc
tcacatgatgatcctgctgaggcaagtgatgtttcaggtgaaggagatgctttatcagat
aaagattcatgtatttcagagaagaccagccctgtggtgggtttcatggaaactacagtg
tctgaaggaaacaagaggtggtccaaagaaaaaacagacagcatcaaagacaaaatattt
ggtaaaacgtatgagagagagaggaagtcaaatccccctattatcctgagagagatttta
cctactacaaaaaaggaagatgtgcctgctgttcaggagtgcttgaataattccagaaaa
gatagcctaaaacggaaaaggaagtctgtccgtcacctacagcctgaggacttcatcaag
aaaaaagatgttgtagaggcaggtggatgccctcaaagtgttaactcgtgccttggagat
gctgaaaagaaaaaatgtgaagaaagttctgctggtaaggagaatcccccacctgagaaa
agaaagggtagtacgctagcagaatttgaggaaggagcatccatgtcgaaaaatgctact
gaaaaggtgacgtgtgagcactctggagagctagaactgagtaactctgatcagaagagc
actaaaaatccaagttctgcagcaaaaagatgcagacgttcaactagaactatgtgcgct
ttacagttagtagtggataaaaactctgcttcccctgatccagctgagacgctgattgag
agctacccaagcagtgaagaaccaaggaatgctgattctgagcaacggcaagtcaggcgc
agcaggaggctccagttactttctgaagaaatgacaaaagagacagcaaaaagggtagta
attaaagaagcgagcaaatatgacggtgaccaggaagggtctgtctctggggttgaaaag
actgtgttagttcgtgattctgaatgcaaagacctgtgtgagcagcaggatatatcgagt
tgcaagccactcaccgatttggagagtgctgatctagaagcaaacgcaatacagatgagt
ccaaaaaattcatctgagactgcagaaactggaaaacgtctattcaatcctgcgccttca
caccagcattcagatttgaattcctcttcacccagagcaggttcagaagaaggtgaggtg
ctgggtaaccctttgctccaccagtctccttcaaagactgttgtgcaaactgcttcccac
ctgcctgaagggaagagggctgaatcgtgtcctactttaccccaggacgaagagcacagt
acacaaaatgttccagagggcctcagaactgaaaagtcaccaatggctaaaaatgtgtca
gaactggctaaggaatctgaagacagtgagctagacacgcagtatctgcgcaatatattt
aggaattcaaagcgtctgtccttcagcctttatcctgctcccaggaaagcatgtgaaata
gatgatgatgcatctgagaagctaaaaatgtcgtgtgctgatcaggtagaaaaaaggcat
agtaaatacttcaatacagaaaacttgcaggaagagaaaactgccgagaacttgagtaat
gtttgtgagaaagagaagatgaagaactgtgaatctgcttgtgctagtcccgtgtcgtgc
actgtcagcaatgctgaatgtgcgtgctctggggactgtcaggatgtttcacaggttgct
aaccaagggaatttgatgacaccggtaagaatgggtgctgctagcagtgaaggcaaaagc
agaccacaaaagggagaacagggaagtgaagagacagcgtcaactgacgcaggggcagaa
agcactttgagacagaatccaggcaaaagcagtagaagtcaaagtgttcagagcaataca
gaagagcacgttttccagaggacagatcttaacacagtcagtgaaacgtgcttcagttca
gaaagtgatcaagcagaaaaggccgaatttgttgacagcgaaggaccggtgctgtgtttt
cagcccagctcaatggcttgtcctacagcttgtcagcaaatgtctgcagaattcaactgc
aaagacactgagaaaagaaggagcaaaagaagacgattaataggggatgaagagccagca
acccaaactgccagcacaggggtgccagagtgtttagttgcagagactctggaagaacct
tttaaaggctgcggtgactgtacagatacgtctgaaacccctgatggcttaatgtgctcc
gatgatgatagcgaagagaacgtcagcttctgtgaagctcctaggaaagacaggtctgcc
gtgtttgtaaaaagtgacttggtgaaagaacgagaccatggaggtgtcagttcccagcca
caatctacagggattcagagggctcggagaagggcacagaaactgcagtcttcatctgaa
gaatctagtgaggatgaagacctgccgtgttttcaggcattaatatttggcaagtcggca
agcacgcctttgcagaccaataaacaggtgacgtcttcgttggggtcttcaggaaatcac
aatgcgttgcctcggggtagaagtcatgaggacaacgtgcagaaaacgcctgaggctgcc
ctaagcaatggctgtgcttcaccaagccaggagtcagaatgctctgtgaatttattttct
tcccagtccaatgtgtctgaagagtcagctgaaggagcacaggagccaaagaaaccttta
ttacaagttcatgcgtccaaacaacagagcaatgtaagtgagagcaaagaaacccttcaa
agttgcgctggagggctgaagagaagaaaaacaaactccaaagatgaatgccaagaagac
ccaaacctaggtgaagcatctggatatgacagtgaaacaagtcatgtagaggattcatgt
gggccattctctcagggtgaaatcctttctacacagcagaagaatgctatgcagaacaac
ctgaagaaactacaacaagaaatggctgcacttgaagcagtgctacaggagcatggaagt
caggactccgaggacttacccgcgtatagggagctgctgggtcccaggagtgaaagaata
cttgcagtggaacaaacaaggcaaagaggagcagaatcaacctcagaaggaagttttgaa
aatcacaaatgcagcacttcaaagggattttcagctgatgaggtccatgttataccaagt
gattcttctaacagtgaagtaaaagtattagaaattgaaaggtctcctgaactgccgtat
ccttctctgaaatcctcttggtcaaagagaccagatctggaggaagaccttcggcatgat
agtgttgtggagaacaaagctcctcaggagacaaagcctgtgcaggaagcagtgcaagaa
tatagtcagagtgaagaagaaaatgcagacgagaagcctgggactaaattaaacaaggca
tctgtcttaaatgatctctgtggaaatgtgaccaggagtccacatgcctcttcctccttt
gtaaagcctcctcaccttcaaactgcagaggcaacaaatacttctgcagtagctcaaaat
gataacaaaagccgttcccaaggatgtaaatcgaagagaagcgtatgttttcctacatct
gtcctgcacaatgcatctgggaaagaaaatgctacaaatccagttgtgactaacaggaaa
aaaatgtcaattgtggcatcaggtctgaatcaaagtgagcatatggtggtccagaagttt
gccagaaaaactcaaagcactttttctaatcacattactgatggaacaacacatgtcata
atgaaaacagataaggagctggtgtgtgaacggacactgaagtactttctgggtattgca
ggaagaaaatgggtagttagttatcagtgggtagttcagtcttttaaagaaggaatgata
ctggatgaggagacctttgaagttagaggagatgtaatcaatgggagaaaccaccaaggt
cctaagagagcaaggcagtctctgactgaaaagatatttaaagactttgagatctgctgc
tatggtcctttcactgatatgactacagggcatcttgaatggatggtggagctttgtggt
gcctctgtagtgaagcaacttcatctgttcacccacaaaatgaattccactgctgttgtg
gttgtgcagccagatgcttggatggaaggcacaagctataaagcaatccagcaaaagaac
aatgttgccgtggtgactcgagagtgggtgctagacagcgttgcttgctacgagtgccag
gagcttgacacttaccttgtgtcctaa
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integrated database retrieval system
