Anaeromyxobacter sp. Fw109-5: Anae109_0735
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Entry
Anae109_0735 CDS
T00559
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03030
DNA replication
afw03410
Base excision repair
afw03420
Nucleotide excision repair
afw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Anae109_0735
03410 Base excision repair
Anae109_0735
03420 Nucleotide excision repair
Anae109_0735
03430 Mismatch repair
Anae109_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afw03032
]
Anae109_0735
03400 DNA repair and recombination proteins [BR:
afw03400
]
Anae109_0735
Enzymes [BR:
afw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Anae109_0735
DNA replication proteins [BR:
afw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Anae109_0735
DNA repair and recombination proteins [BR:
afw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Anae109_0735
NER (nucleotide excision repair)
GGR (global genome repair) factors
Anae109_0735
MMR (mismatch excision repair)
DNA ligase
Anae109_0735
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Anae109_0735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
BRCT_2
RNA_ligase
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ABS24948
UniProt:
A7H8A2
LinkDB
All DBs
Position
834817..836916
Genome browser
AA seq
699 aa
AA seq
DB search
MRADADRDSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELAT
SDSPTQRVSGAPSERFERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVA
EPKLDGLAVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGEVPPR
VEVRGEVLLFKEHFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYEA
LVPGAEPGGARAGPWAWRTHAEKLEALARWGFETNAENERCEGIAAVKAYRDRMAERRFA
LPYDTDGVVVKVDDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGILTP
VVDFEPVRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIPEVVMPLKERRTGEE
RPFAFPAECPICGAKVVREEGEKVYRCTGAACPAQLVGRLTHFAQRRAMDIDGLGDKLAL
GLVERGLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMVDALERSKATTL
RRLLFALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETAREIRAWTEEPQ
NRRVVERLLAAGVRPAPETVDAGGPFAGKTVVLTGGLAALSRDDAKAEIERRGGKVSGSV
SRKTDLVVAGAEAGSKLEKAQALGVRVVGEEEFLRMLEE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgacgccgacagggactccgccgagacgcgcgccgcggagctccgcgcgcgg
atcctggacgccgaccacgcctactacgtcctcgatcgcccggtgctcgcggacgccgag
tacgaccggctcgtccgggagctcgccgagatcgaggccgcccaccccgagctcgccacc
tccgactcgcccacgcagcgcgtgtcgggcgcgccgagcgagcggttcgagcgcgtcgtc
caccgcgagccgatgctctccctcgggaacatccagtccgacggcgagctcgacgagttc
gacgcgcgcgtgcaccgcctcctcgggctcgccggggacgtccaggtcggctacgtcgcc
gagcccaagctcgacggcctcgccgtcgagctggtctacgagggcggccgcctcgtccag
ggctccacgcgcggcgacggcgtgaacggggaggacgtcaccgcgaacctgcgcacggtc
ggccgcacgcgcgcgaaccgcggggtgccggagcggctcgcgggcgaggtcccgccgcgc
gtcgaggtgcgcggcgaggtgctgctcttcaaggagcacttcgaggcgatgaaccggcag
atcctccgcgccggcgacgagccgttcgcgaaccctcgcaacgccgcggcggggtcgctc
cggcagctcgactggcgcgtgacggcgaggcgcccgctctccttcatcgcgtacgaggcg
ctcgtgcccggggcggagcccgggggcgcgcgcgccgggccctgggcctggcgcacccac
gcggagaagctcgaggccctcgcccgctgggggttcgagacgaacgcggagaacgagcgc
tgcgaggggatcgccgcggtgaaggcctaccgcgatcggatggcggagcgccgcttcgcg
ctgccgtacgacaccgacggcgtggtggtgaaggtggacgacctcgactggcgccgcagg
ctgggcgccgcgtcgaagttcccgcgctgggcggtcgcgttcaagtacccgccgcaggag
gaggcgacgcgcatccggcggatctgggcgtcggtggggcgcaccgggatcctcacgccc
gtcgtggacttcgagccggtcaggctctccggcgcgatggtctcgcgcgcgacgctgcac
aacgaggacgagatgcgccgcaaggacgtcctcgagggcgactggatcctcgtgcgccgc
gccggggaggtcatccccgaggtggtcatgccgctgaaggagcggcgcaccggcgaggag
cgccccttcgcgttccccgcggagtgcccgatctgcggcgcgaaggtggtgcgcgaggag
ggcgagaaggtgtaccgctgcaccggcgccgcgtgccccgcgcagctcgtcgggcggctc
acccacttcgcccagcgccgcgcgatggacatcgacgggctcggcgacaagctcgcgctc
ggcctcgtcgagcgcgggctcgtgaaggacttcgcggacctctacgccgtcccgttcccc
gcctggcaggagctgttcagccggccgcgcaaggaggagcgggacgccaaggcggagctc
ccgcagaagagcgcgcagaacatggtggacgccctcgagcgctcgaaggcgacgacgctc
cggcgcctcctcttcgcgctcgggatcccgcaggtcggcgaggccaccgccgcgacgctc
gcgcgccacttcggcgagctcgcgcgcttcatggacgcgagcgaggacgcgctcctcgcg
gtgcgcgacgtcggcccggagacggcgcgcgagatccgcgcctggacggaggagccgcag
aaccggcgcgtggtggagcgcctcctcgccgccggcgtgcggcccgcccccgaaaccgtc
gacgctggcggcccgttcgcggggaagaccgtggtcctcacgggcgggctcgcggcgctc
tcgcgcgacgacgccaaggccgagatcgagcggcgcggcgggaaggtgtcgggcagcgtc
tcccgcaagaccgatctcgtcgtcgccggcgcggaggccggctcgaagctcgagaaggcg
caggcgctcggcgtccgggtggtcggcgaggaggagttccttcggatgctggaggagtga
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