KEGG   Anaeromyxobacter sp. Fw109-5: Anae109_0735
Entry
Anae109_0735      CDS       T00559                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
afw  Anaeromyxobacter sp. Fw109-5
Pathway
afw03030  DNA replication
afw03410  Base excision repair
afw03420  Nucleotide excision repair
afw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:afw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Anae109_0735
   03410 Base excision repair
    Anae109_0735
   03420 Nucleotide excision repair
    Anae109_0735
   03430 Mismatch repair
    Anae109_0735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afw03032]
    Anae109_0735
   03400 DNA repair and recombination proteins [BR:afw03400]
    Anae109_0735
Enzymes [BR:afw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Anae109_0735
DNA replication proteins [BR:afw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Anae109_0735
DNA repair and recombination proteins [BR:afw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Anae109_0735
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Anae109_0735
   MMR (mismatch excision repair)
    DNA ligase
     Anae109_0735
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Anae109_0735
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH BRCT_2 RNA_ligase RUBY_RBDX
Other DBs
NCBI-ProteinID: ABS24948
UniProt: A7H8A2
LinkDB
Position
834817..836916
AA seq 699 aa
MRADADRDSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELAT
SDSPTQRVSGAPSERFERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVA
EPKLDGLAVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGEVPPR
VEVRGEVLLFKEHFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYEA
LVPGAEPGGARAGPWAWRTHAEKLEALARWGFETNAENERCEGIAAVKAYRDRMAERRFA
LPYDTDGVVVKVDDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGILTP
VVDFEPVRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIPEVVMPLKERRTGEE
RPFAFPAECPICGAKVVREEGEKVYRCTGAACPAQLVGRLTHFAQRRAMDIDGLGDKLAL
GLVERGLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMVDALERSKATTL
RRLLFALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETAREIRAWTEEPQ
NRRVVERLLAAGVRPAPETVDAGGPFAGKTVVLTGGLAALSRDDAKAEIERRGGKVSGSV
SRKTDLVVAGAEAGSKLEKAQALGVRVVGEEEFLRMLEE
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgcgggccgacgccgacagggactccgccgagacgcgcgccgcggagctccgcgcgcgg
atcctggacgccgaccacgcctactacgtcctcgatcgcccggtgctcgcggacgccgag
tacgaccggctcgtccgggagctcgccgagatcgaggccgcccaccccgagctcgccacc
tccgactcgcccacgcagcgcgtgtcgggcgcgccgagcgagcggttcgagcgcgtcgtc
caccgcgagccgatgctctccctcgggaacatccagtccgacggcgagctcgacgagttc
gacgcgcgcgtgcaccgcctcctcgggctcgccggggacgtccaggtcggctacgtcgcc
gagcccaagctcgacggcctcgccgtcgagctggtctacgagggcggccgcctcgtccag
ggctccacgcgcggcgacggcgtgaacggggaggacgtcaccgcgaacctgcgcacggtc
ggccgcacgcgcgcgaaccgcggggtgccggagcggctcgcgggcgaggtcccgccgcgc
gtcgaggtgcgcggcgaggtgctgctcttcaaggagcacttcgaggcgatgaaccggcag
atcctccgcgccggcgacgagccgttcgcgaaccctcgcaacgccgcggcggggtcgctc
cggcagctcgactggcgcgtgacggcgaggcgcccgctctccttcatcgcgtacgaggcg
ctcgtgcccggggcggagcccgggggcgcgcgcgccgggccctgggcctggcgcacccac
gcggagaagctcgaggccctcgcccgctgggggttcgagacgaacgcggagaacgagcgc
tgcgaggggatcgccgcggtgaaggcctaccgcgatcggatggcggagcgccgcttcgcg
ctgccgtacgacaccgacggcgtggtggtgaaggtggacgacctcgactggcgccgcagg
ctgggcgccgcgtcgaagttcccgcgctgggcggtcgcgttcaagtacccgccgcaggag
gaggcgacgcgcatccggcggatctgggcgtcggtggggcgcaccgggatcctcacgccc
gtcgtggacttcgagccggtcaggctctccggcgcgatggtctcgcgcgcgacgctgcac
aacgaggacgagatgcgccgcaaggacgtcctcgagggcgactggatcctcgtgcgccgc
gccggggaggtcatccccgaggtggtcatgccgctgaaggagcggcgcaccggcgaggag
cgccccttcgcgttccccgcggagtgcccgatctgcggcgcgaaggtggtgcgcgaggag
ggcgagaaggtgtaccgctgcaccggcgccgcgtgccccgcgcagctcgtcgggcggctc
acccacttcgcccagcgccgcgcgatggacatcgacgggctcggcgacaagctcgcgctc
ggcctcgtcgagcgcgggctcgtgaaggacttcgcggacctctacgccgtcccgttcccc
gcctggcaggagctgttcagccggccgcgcaaggaggagcgggacgccaaggcggagctc
ccgcagaagagcgcgcagaacatggtggacgccctcgagcgctcgaaggcgacgacgctc
cggcgcctcctcttcgcgctcgggatcccgcaggtcggcgaggccaccgccgcgacgctc
gcgcgccacttcggcgagctcgcgcgcttcatggacgcgagcgaggacgcgctcctcgcg
gtgcgcgacgtcggcccggagacggcgcgcgagatccgcgcctggacggaggagccgcag
aaccggcgcgtggtggagcgcctcctcgccgccggcgtgcggcccgcccccgaaaccgtc
gacgctggcggcccgttcgcggggaagaccgtggtcctcacgggcgggctcgcggcgctc
tcgcgcgacgacgccaaggccgagatcgagcggcgcggcgggaaggtgtcgggcagcgtc
tcccgcaagaccgatctcgtcgtcgccggcgcggaggccggctcgaagctcgagaaggcg
caggcgctcggcgtccgggtggtcggcgaggaggagttccttcggatgctggaggagtga

DBGET integrated database retrieval system