Antechinus flavipes (yellow-footed antechinus): 127537907
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Entry
127537907 CDS
T08818
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127537907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afz03400
]
127537907
Enzymes [BR:
afz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
127537907
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127537907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
127537907
NCBI-ProteinID:
XP_051817209
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All DBs
Position
5:277585851..277608113
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AA seq
413 aa
AA seq
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MEADDPSRYYFEQFQAFYQFPYYPMMATPPSMEFMNEQPALPEIPLPLPLPTFEPEPIPE
EKGRKRRTRSSEAKKSEPKKPAATPRAPRAAKSKGKQEKITDTFKVKRKVDRFNGVSEAE
LLTKTLPDILAFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSETQLNHMDD
HTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIF
SKEVFGVKVKKLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLRDLRDQ
LKGIVPNTDVQEVQYSFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCEKACDVDPPCA
FSLDGTGTNSLALCGEPTFGDIANDQWLTQSFTDQILPSFSPFGTLEQEGGCV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgacgacccgagcagatattattttgagcaatttcaagcattttaccagttt
ccgtattatccaatgatggctacacctcccagcatggagtttatgaatgaacaaccagct
ctgccagaaatcccactcccactcccactcccaacctttgaaccggaacctattccagaa
gaaaaaggaagaaaaagaagaaccagatcttcggaggcaaaaaagtcagagccgaaaaaa
cccgctgcaacccccagagcacccagggcagccaaatccaaggggaaacaagaaaaaatt
accgacactttcaaagtgaaaaggaaagtggatcgttttaatggggtttcagaagctgaa
cttctgaccaagaccctgcctgatattttggccttcaacctggacattgtcattattggc
ataaacccaggactaatggcagcttacaaagggcatcattacccaggacctggaaaccat
ttttggaagtgtctctttatgtctgggctgagtgagacccagttaaatcatatggatgat
catactttgccaggaaagtatggtattggctttacaaatatggtggagaggactactccg
ggcagcaaggatctttcaagtaaagagtttcgagaaggaggccgtattttggtgcagaaa
ttacagaaataccaacctcggatagcggttttcaatggaaaatgtatttatgagattttc
agcaaggaagtttttggagtaaaagttaagaagttggaatttggacttcagcctcataag
gttcctgatacagaaactctctgctatgtcatgccgtcctccagtgcgagatgtgctcag
ttcccacgggcacaagataaagttcattattatatcaaactgagagacttgagagaccag
ctgaaaggcatcgtacctaacacagatgtacaggaggtgcagtattcgtttgatcttcag
cttgcccaagaggatgccaagaagatggctgttaaggaagaaaagtatgatccaggttac
gaggcagcgtatggaggtgcttactgtgaaaaggcatgtgatgtcgatccgccgtgtgcc
ttctctttggatggaacaggaacaaatagtctagccttatgtggagaaccaacttttggg
gacattgcaaatgatcagtggctgacgcagtcattcacagaccagattctgccttccttc
agtcccttcgggaccctagagcaagaaggcggctgtgtgtga
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