KEGG   Antechinus flavipes (yellow-footed antechinus): 127538369
Entry
127538369         CDS       T08818                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03420  Nucleotide excision repair
afz04066  HIF-1 signaling pathway
afz04110  Cell cycle
afz04114  Oocyte meiosis
afz04120  Ubiquitin mediated proteolysis
afz04141  Protein processing in endoplasmic reticulum
afz04310  Wnt signaling pathway
afz04350  TGF-beta signaling pathway
afz04710  Circadian rhythm
afz05170  Human immunodeficiency virus 1 infection
afz05200  Pathways in cancer
afz05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127538369
   04120 Ubiquitin mediated proteolysis
    127538369
  09124 Replication and repair
   03420 Nucleotide excision repair
    127538369
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    127538369
   04350 TGF-beta signaling pathway
    127538369
   04066 HIF-1 signaling pathway
    127538369
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127538369
   04114 Oocyte meiosis
    127538369
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    127538369
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127538369
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    127538369
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    127538369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afz04121]
    127538369
   03400 DNA repair and recombination proteins [BR:afz03400]
    127538369
Enzymes [BR:afz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     127538369
Ubiquitin system [BR:afz04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   127538369
  Multi subunit type E3
   SCF complex
    Ring finger protein
     127538369
   Cul2 complex
     127538369
   Cul3 complex
     127538369
   Cul4 complex
     127538369
   Cul7 complex
     127538369
   Cul8 complex
     127538369
   Cul9 complex
     127538369
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127538369
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127538369
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 127538369
NCBI-ProteinID: XP_051818066
LinkDB
Position
5:288718409..288730100
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcggcgatggatgtggacacccccagtggcaccaacagcggcgccggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagctctctgggcctgggatattgtggttgac
aactgtgccatctgcaggaaccacattatggacctttgtatagaatgtcaagccaatcag
gcatccgccacctctgaagaatgtactgtcgcatggggagtctgcaatcacgccttccac
ttccactgcatctctcgctggctcaaaaccaggcaggtgtgcccgctggacaacagagag
tgggagtttcaaaagtatgggcattag

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