KEGG   Antechinus flavipes (yellow-footed antechinus): 127538517
Entry
127538517         CDS       T08818                                 
Name
(RefSeq) LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP beta 1 chain-like
  KO
K06752  MHC class II antigen
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04145  Phagosome
afz04514  Cell adhesion molecules
afz04612  Antigen processing and presentation
afz04640  Hematopoietic cell lineage
afz04658  Th1 and Th2 cell differentiation
afz04659  Th17 cell differentiation
afz04672  Intestinal immune network for IgA production
afz04940  Type I diabetes mellitus
afz05140  Leishmaniasis
afz05145  Toxoplasmosis
afz05150  Staphylococcus aureus infection
afz05152  Tuberculosis
afz05164  Influenza A
afz05166  Human T-cell leukemia virus 1 infection
afz05168  Herpes simplex virus 1 infection
afz05169  Epstein-Barr virus infection
afz05310  Asthma
afz05320  Autoimmune thyroid disease
afz05321  Inflammatory bowel disease
afz05322  Systemic lupus erythematosus
afz05323  Rheumatoid arthritis
afz05330  Allograft rejection
afz05332  Graft-versus-host disease
afz05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:afz00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127538517
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127538517
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    127538517
   04612 Antigen processing and presentation
    127538517
   04658 Th1 and Th2 cell differentiation
    127538517
   04659 Th17 cell differentiation
    127538517
   04672 Intestinal immune network for IgA production
    127538517
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    127538517
   05164 Influenza A
    127538517
   05168 Herpes simplex virus 1 infection
    127538517
   05169 Epstein-Barr virus infection
    127538517
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    127538517
   05152 Tuberculosis
    127538517
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    127538517
   05140 Leishmaniasis
    127538517
  09163 Immune disease
   05310 Asthma
    127538517
   05322 Systemic lupus erythematosus
    127538517
   05323 Rheumatoid arthritis
    127538517
   05320 Autoimmune thyroid disease
    127538517
   05321 Inflammatory bowel disease
    127538517
   05330 Allograft rejection
    127538517
   05332 Graft-versus-host disease
    127538517
  09166 Cardiovascular disease
   05416 Viral myocarditis
    127538517
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    127538517
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afz04147]
    127538517
Exosome [BR:afz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127538517
  Exosomal proteins of epithelial cells
   127538517
  Exosomal proteins of breast milk
   127538517
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3
Other DBs
NCBI-GeneID: 127538517
NCBI-ProteinID: XP_051818290
LinkDB
Position
5:26484835..26485403
AA seq 189 aa
MSSIYVIKTGPDLENRREHGQPVHRHIHNREHFVNFDGGLGXVWDVMDLGLGWDGYWNSQ
RFGDLTAEVYKPLSGRVSVEPKVNRYPSKKAPLGHHYLLICSVNGFYPRDTEVRSFLNEQ
EKTARVVSTSLISNGNWTYPVLVMLEMTPKRGEVYTCQVKPFSLQRPVSPGPLSASLSYL
ETPCLCPRG
NT seq 570 nt   +upstreamnt  +downstreamnt
atgtcatccatctatgttattaaaacaggaccggacttggagaaccggcgggagcatggg
cagccagtacacagacacatccacaaccgggagcactttgtgaactttgacggtggcttg
gggngtgtctgggacgtgatggatctggggctggggtgggatggatattggaacagccag
aggttcggagaccttacggcagaggtgtataaacccttgtcaggtcgtgtgagtgtggaa
cccaaggtgaataggtatccatcaaagaaggctcccctgggacaccattacctgcttatc
tgctctgtcaatggtttctatcccagggacactgaggtcaggtccttcctgaatgagcaa
gagaaaacagctagagtggtgtccacaagcctgatcagcaatggaaactggacttacccg
gtcctggtgatgctggaaatgacccccaagcgtggagaagtctacacctgccaagtgaag
cccttcagccttcagagacctgtgtcccctggacctctttcagcctccctctcatatttg
gagactccctgcttgtgtccaagaggttag

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