Antechinus flavipes (yellow-footed antechinus): 127548643
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Entry
127548643 CDS
T08818
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127548643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afz04990
]
127548643
Domain-containing proteins not elsewhere classified [BR:
afz04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
127548643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
EGF_TEN
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
127548643
NCBI-ProteinID:
XP_051832091
LinkDB
All DBs
Position
2:208540500..208980203
Genome browser
AA seq
1727 aa
AA seq
DB search
MEVTWIRWGLLLWAGVFASSVHSRVRRITYVVRPGQSGSSDAGVAGATGQLGSALTLGGH
QRQQRTFNVALNTRYSSSSSSSSSSSSSSRSTQERTRRMSKPSTPSVQVLRQPQPPQEPP
LGLGPGVQHHPKPVGHPSAAQLTKPGRHVVRSKLQQETHSSSSSSSLQVHQKQQLQGVNV
CGGQCCQGWSKAPGSQRCTKPNCIPQCQNGGMCLRPQLCVCKPGTKGKACENTIVQDSPS
ISASGSQGPGPSSWIIPEQAMQHSSSQKMEIAQRVSPVAQMTFTLKPKTSVGISQQMHSQ
VTPLSSQNLMIHHGQMQEYVIKPKYFPAQKMISGEQSTEGSLPLRMRQDHIVSPFQLSNH
TGRIKVVFTPSICKVTCTKGSCQNNCEKGNTTTLISENGHAADTLTATNFRVVICHLPCM
NGGQCSSRDKCQCPPNYTGKLCQIPVHGANAPKLYQHPQQSNKGLGTHIVHSTHTLPLTM
TGQQGVKVKFPPNIVNIHVKHPPEASVQIHQVSRIDGSTGQKVKESQPGQSQISYQGVPI
QKTQTIHSTYSHQQLVPHVYPVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTS
WGFHKCQKCPKKPAYPVYSQMMECPQGYKRVNATFCQDINECQMQGACPNGECLNTLGSY
RCTCKLGFVPDPTLSTCIPDNPVISEEKGPCYRLVNSGRQCMHPLSVQLSKQLCCCSVGK
AWGPHCEKCPLPGTAAFKEICPGGMGYTVSGVHRRRPVHHHIGKGPIYIKPKNIQPVAKS
THPPPLPAKEEPVEALTFSQEKGPQVDVQVATAAPEKELVDQEKTKLEPGQPQLSPGIST
INLHPQYPVVIEKTSPPVPVEVAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCIN
LPVRYTCICYEGYKFSEHQRKCVDIDECTQIHHLCSQGRCENTEGSFLCICQAGYMANPE
GTDCIDVDECLRPETCGDGYCINTIGAFKCEYCDSGYRMNRRGQCEDIDECLTASTCPDE
QCINTPGSYQCVPCTEGFRGWNGQCLDIDECLDPKVCRNGSCSNLEGSYMCTCHKGYNPT
PDRKQCKDIDECQHGNLCIHGHCKNTEGSFKCTCGKGYHLSAAKDQCEDIDECEHHHLCT
NGQCRNTEGSFRCLCDQGYRASAVGDHCEDINECLEDSSVCQGGDCTNTEGSYKCTCSSG
FQLINNKECQDINECEQKDLCGPHGECLNTDGSFHCICEQGFSISADGQTCEDIDECVNN
TICDSHGFCDNTAGSFRCLCYQGFQAPQDGQGCVDVNECEMLSGICGEAFCENVEGSFLC
MCSDENQEYNPMTGQCRSRSSTEAEVDLPEEEKEEKKECYYNLNDANFCDNVLTSNVTKQ
ECCCTLGAGWGDNCEIFPCPVFGTAEFTEMCPEGKGFIPTGHSSYSVTGQNYKDADECQL
FGQEICKHGFCLNTQPGYECYCKQGTYYDPVKLQCFDMDECQDPNSCIDGQCINTEGSYN
CFCTHPMVLDSTEKRCIRPTDSNEQTEETDVYQDLCWEHLSDEYVCSRPLVGKQTTYTEC
CCLYGEAWGMQCALCPMKDSDDYAQLCNIPVTGPRRPYGQDALVDFNEHYSPETDPYFVQ
DRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMTKMTCVDVNECDELN
NRMSLCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNPEKDSDLE
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacttggatcaggtggggactcctgttgtgggccggggtgttcgcgtcctcg
gtgcacagcagggtgagaaggatcacctatgtggtgcgtccgggccagagcggctcctct
gacgccggggtcgctggggctacggggcagctgggctctgccctgactctaggagggcat
cagaggcaacagagaactttcaatgttgcgctcaacacccgctacagcagcagcagcagt
agcagcagcagtagcagcagcagcagcaggagcacacaggaacggacccgcaggatgagc
aaaccaagcacgccaagcgtgcaagttctccggcagccgcagcccccgcaggagcccccg
ctcggcttgggccccggcgtgcagcaccatcccaagcccgttggccacccttcggcggcg
cagttaaccaaacccggcaggcacgttgtgcgctccaaactccaacaggagacccacagc
agcagctccagctccagcttgcaagttcaccagaagcaacagctgcagggggtgaatgtc
tgtggagggcagtgctgtcaaggctggagcaaagcccctggttctcagaggtgcaccaaa
ccaaactgcatcccacagtgccaaaatggagggatgtgtctgcgacctcagctgtgcgta
tgcaaaccagggacaaaaggcaaggcctgtgagaatacaattgtacaagactctccttcc
atctctgcctctggcagtcagggccctgggccttcttcatggatcatcccagagcaggct
atgcagcattcttcatctcagaaaatggagattgcacagagagtcagccctgtggctcaa
atgacctttactctgaagccgaagacttcagtaggaatctctcaacagatgcattcacaa
gtgacacccctttcctcacagaatttgatgattcatcatggtcagatgcaggagtatgtg
atcaagcccaagtattttccagctcagaaaatgatttcaggagaacagtccactgaaggc
tcattacctctacgaatgaggcaggatcatattgtatcaccttttcagttgagtaaccac
actggccgcatcaaggtggtctttactccaagcatctgtaaagtgacctgcactaagggc
agttgtcagaataactgtgagaaggggaataccaccactctcattagtgaaaatgggcat
gcggcagacactttgacagccacaaacttccgagtagtaatttgtcaccttccatgtatg
aatggaggtcagtgcagttcaagggacaaatgccagtgccctccgaattacactgggaag
ctatgccagatcccagtacatggtgctaatgcccctaaactctaccagcatcctcagcaa
tcaaacaaaggcttgggaacacacatcgttcactctacacatacccttcctctgactatg
acaggccagcaaggagtcaaagtgaaattccccccaaacatagtgaatatccatgtgaaa
catccaccagaggcctcagtacagattcatcaggtttcaagaattgatggctccacgggc
caaaaggtgaaagaaagccaaccaggccagtcacaaatctcttatcaaggagtacccatt
cagaagactcaaacgatacattcaacatactctcatcagcaactcgttcctcatgtatat
cctgttgcagctaagactcagctgggaaggtgcttccaggaaaccattggatcacagtgt
ggtaaagcactccctggactttcaaagcaagaagactgctgtgggaccgtgggcacttca
tggggttttcacaaatgccagaaatgtcccaagaagccagcttacccagtgtacagccaa
atgatggagtgccctcaaggttacaagagagtcaatgccaccttttgccaagacattaat
gaatgccagatgcaaggagcatgccctaatggtgagtgtttgaatacactgggcagctat
aggtgcacctgcaaactgggatttgtgccagatcctacattgtcaacttgtatccctgac
aatcctgtaatctctgaagaaaaaggaccctgctacagacttgtcaattcaggaagacag
tgtatgcaccccctttctgttcagctcagcaagcagctctgctgttgcagcgttgggaag
gcatggggaccacattgtgagaagtgtccccttccaggaacagctgcttttaaagaaatc
tgtcctggtggaatgggttatacagtttctggcgttcatagacgcaggccagttcatcac
catataggtaaaggacctatatatatcaagcccaagaacatccaacctgttgctaaaagt
actcatcctccacctctcccagcaaaagaagagccagtggaggcgctgaccttctcccag
gaaaaagggcctcaggtggatgtgcaagtggcaactgcagctcctgagaaggaattagtt
gaccaagaaaaaaccaaacttgaaccaggtcaaccgcagctgtctcctggcatttcaacc
attaacctacatccacagtatccagtagtgattgaaaaaacatcacctcctgtacctgtt
gaggttgctcctgaagcttctacatcaagtgccagccaagtgattgcacccactcaagta
acagaaatcaatgaatgtacagtgaatccagatatctgtggagcaggacattgcattaat
ttgccagtgagatatacttgtatctgctatgagggatacaaattcagtgaacatcaaaga
aaatgtgttgacattgatgaatgtactcagattcaccatctttgctcccaggggcgatgt
gaaaatactgaaggaagtttcttatgtatttgccaagcaggctatatggccaatccagag
ggaactgactgtatagatgttgatgaatgtctgagaccagagacatgtggggatggatac
tgtataaatactattggtgcttttaaatgtgaatattgtgacagtgggtatcgaatgaac
agaagaggccagtgtgaagatattgatgaatgtttaactgcaagtacttgtccagatgaa
caatgcattaacactcctggatcttaccaatgtgttccttgcacagaaggattcagaggc
tggaatggacagtgtctcgatattgatgagtgcttggatccaaaagtatgcaggaatggc
agctgttccaaccttgagggttcttacatgtgtacgtgccacaaaggttacaacccaact
cctgatagaaagcaatgcaaagatattgatgaatgtcagcatggtaacctttgcattcat
gggcactgcaaaaacacagagggttcattcaagtgtacttgtggaaaagggtatcatctg
tctgcagcaaaagaccaatgtgaagatattgatgaatgtgagcaccaccatctgtgcaca
aatggacaatgtagaaatacagaaggatctttcaggtgcttatgtgatcagggttacaga
gcatctgcagtaggagaccattgtgaagatatcaatgaatgcttggaggacagcagtgtt
tgccagggaggagactgcactaatactgaaggttcttataaatgtacttgttccagtggc
ttccagctaattaacaataaggaatgtcaagatattaatgaatgtgagcaaaaagacctc
tgtggtcctcatggagaatgtctaaatacagatggttcttttcactgcatctgtgaacaa
ggtttctccatttctgcagatggccaaacatgtgaagatattgatgaatgtgtaaacaac
actatttgtgacagtcatggtttttgtgacaatacagctggttccttccgctgtctctgt
tatcagggctttcaggccccacaggatggacaagggtgtgtagatgtgaatgaatgtgaa
atgcttagtggaatatgtggtgaagccttctgtgaaaatgtagaaggatccttcctctgt
atgtgttctgatgaaaaccaggagtataatcctatgactggacagtgccgctccagatcc
tcaacagaggcagaagtagatctacctgaagaagaaaaagaagaaaagaaagaatgctac
tataatttaaatgacgccaatttctgtgataatgtgctgacatccaatgttactaagcaa
gaatgctgctgtacattgggtgctggatggggagataactgtgagatcttcccatgtcct
gtctttggaactgctgaattcactgaaatgtgtcctgaaggaaaaggttttattcctact
ggccactcatcctatagtgtcactggtcaaaactacaaagatgcagatgaatgtcagctt
tttggtcaagaaatctgcaaacatggcttttgtttgaacactcagcctggctatgaatgc
tactgcaagcaaggaacatattatgatccagtcaaattgcagtgttttgatatggatgaa
tgtcaggacccaaacagttgtattgatggtcagtgcataaatactgaaggatcttataac
tgcttctgtacccatccaatggtgctggactctacagaaaagagatgtataaggccaacg
gattcaaatgaacaaacggaagaaactgatgtctaccaggatctttgttgggaacacctc
agtgatgagtatgtttgtagccgaccactggttgggaagcagacaacttacactgaatgt
tgctgtttgtatggagaggcctggggcatgcagtgtgctctttgccctatgaaggattca
gatgattatgcccaactgtgcaacattccagtcacaggacctcggcggccatatggacag
gatgctttggttgacttcaatgaacattattctccagaaacagatccttactttgttcag
gaccgtttcttaaatagttttgaggagttgcaggcagaagaatgtggcattctcaatgga
tgtgaaaatggccgctgtgttagagtacaggagggatatacatgtgactgctttgatggc
tatcacttagatatgaccaagatgacttgtgttgatgtaaatgaatgtgatgaactgaac
aaccggatgtcactctgcaaaaatgccaagtgcattaacacagaaggttcatacaaatgt
ttgtgtctgcctggctatgttccttcagataaacccaactactgcacaccactgaatcca
gaaaaagacagtgacttggagtag
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integrated database retrieval system
