KEGG   Antechinus flavipes (yellow-footed antechinus): 127549124
Entry
127549124         CDS       T08818                                 
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04010  MAPK signaling pathway
afz04064  NF-kappa B signaling pathway
afz04071  Sphingolipid signaling pathway
afz04137  Mitophagy - animal
afz04141  Protein processing in endoplasmic reticulum
afz04210  Apoptosis
afz04217  Necroptosis
afz04380  Osteoclast differentiation
afz04621  NOD-like receptor signaling pathway
afz04622  RIG-I-like receptor signaling pathway
afz04657  IL-17 signaling pathway
afz04668  TNF signaling pathway
afz04920  Adipocytokine signaling pathway
afz04932  Non-alcoholic fatty liver disease
afz05010  Alzheimer disease
afz05014  Amyotrophic lateral sclerosis
afz05016  Huntington disease
afz05017  Spinocerebellar ataxia
afz05022  Pathways of neurodegeneration - multiple diseases
afz05132  Salmonella infection
afz05135  Yersinia infection
afz05160  Hepatitis C
afz05163  Human cytomegalovirus infection
afz05167  Kaposi sarcoma-associated herpesvirus infection
afz05168  Herpes simplex virus 1 infection
afz05169  Epstein-Barr virus infection
afz05170  Human immunodeficiency virus 1 infection
afz05200  Pathways in cancer
afz05203  Viral carcinogenesis
afz05222  Small cell lung cancer
afz05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127549124
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127549124
   04064 NF-kappa B signaling pathway
    127549124
   04668 TNF signaling pathway
    127549124
   04071 Sphingolipid signaling pathway
    127549124
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    127549124
  09143 Cell growth and death
   04210 Apoptosis
    127549124
   04217 Necroptosis
    127549124
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    127549124
   04622 RIG-I-like receptor signaling pathway
    127549124
   04657 IL-17 signaling pathway
    127549124
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    127549124
  09158 Development and regeneration
   04380 Osteoclast differentiation
    127549124
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127549124
   05203 Viral carcinogenesis
    127549124
  09162 Cancer: specific types
   05222 Small cell lung cancer
    127549124
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    127549124
   05160 Hepatitis C
    127549124
   05168 Herpes simplex virus 1 infection
    127549124
   05163 Human cytomegalovirus infection
    127549124
   05167 Kaposi sarcoma-associated herpesvirus infection
    127549124
   05169 Epstein-Barr virus infection
    127549124
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127549124
   05135 Yersinia infection
    127549124
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127549124
   05014 Amyotrophic lateral sclerosis
    127549124
   05016 Huntington disease
    127549124
   05017 Spinocerebellar ataxia
    127549124
   05022 Pathways of neurodegeneration - multiple diseases
    127549124
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    127549124
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    127549124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afz03019]
    127549124
   04121 Ubiquitin system [BR:afz04121]
    127549124
Enzymes [BR:afz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127549124
Messenger RNA biogenesis [BR:afz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     127549124
Ubiquitin system [BR:afz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    127549124
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-RING_6 zf-C3HC4_4 zf-C3HC4_2 Thioredoxin_3 zf-RING_UBOX MATH
Other DBs
NCBI-GeneID: 127549124
NCBI-ProteinID: XP_051832904
LinkDB
Position
2:complement(260248849..260315467)
AA seq 633 aa
MDLDSGLLGHLPNSAANLLRDLGGVTAPLCSSVSPSVTMGRLFFNNRTFPSGEQRQPDTP
WSLISMGHGQKAAKVSLTTGQDPEQVVSDTGPVSPVLDQGLETHLGVVAHMATANSTPPG
SLDLLQPGFSKDILGTKLEDKYLCSACKNILRRPFQAQCGHRYCSYCLTSIISTGPQNCA
ACIQEGIYEEGISILESSSAFPDNAARREVESLPAICVNDDCTWKGTIKEYESCHEGHCP
FMLIECPACKWMIKLGEKEHHSERECPKRSLNCRYCKALFYYPDIKAHDEVCPKFPLTCE
GCGKKKILREKFQDHVKACGKCKGPCKFHVVGCTEMVENEKQQDHEIQKVAEHLCMLLNF
VLEARNFHGDIGPLLGQGDMGGWGNNSLTLGSEVSKSSELLERCETLERKTVTFENIVCV
LNREVERVSMTAEACSRQHRLDQEKIETLSTKVQQLERSIGLKDLAMADMEQKILEMEAS
TYDGIFIWKITDFARKRQEAMAGRSPAIFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLS
LFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSDMNIASG
CPLFCPVSKMESKNSYVRDDAIFIKAIVDLTGL
NT seq 1902 nt   +upstreamnt  +downstreamnt
atggaccttgattctgggctcctaggtcatcttcccaactctgctgccaatctcttgcgt
gatcttggtggagtcactgctcccctctgttcctcagtttctccgtctgtaacaatgggg
agattatttttcaacaacagaacatttccctcgggtgagcagagacagcctgatactccc
tggagcctgatatcaatgggacatggacaaaaggcagcaaaagtttctctgactactgga
caagaccctgaacaggtagtctctgatactggacctgtcagtccagttctggatcagggt
cttgaaactcatttgggggttgtagctcacatggcaacagcaaattctactcctccaggc
tctttagatttgcttcagcctggattttcaaaggatattctaggaacaaaactagaagat
aaatatctctgctctgcatgcaagaacattttgagaagaccatttcaagctcagtgtgga
catcgttactgctcttattgtttgaccagcatcataagcactgggcctcagaattgtgct
gcctgcattcaggagggaatatatgaagaaggcatttctattttagaaagtagttcggct
tttccagataatgctgctcgaagagaggtagaaagcctaccggctatctgtgtcaatgat
gattgcacatggaaaggcactataaaggaatatgagagctgccatgaaggacactgccca
ttcatgttaatcgagtgcccagcatgtaagtggatgatcaaactgggtgagaaggaacat
cattctgagcgggaatgcccaaagagaagcctcaactgcagatactgcaaagctcttttc
tactatcctgacattaaggcccatgatgaggtctgtcccaaatttcccttgacttgtgaa
ggctgtggtaagaaaaaaattcttcgagaaaaatttcaggaccatgtcaaggcctgtggc
aaatgcaaagggccctgcaaattccatgttgttggctgtaccgaaatggtggaaaatgag
aaacaacaggatcatgaaattcagaaagtggctgagcacctctgcatgttgttaaatttt
gtccttgaggctaggaacttccatggagatattggtcccctcctcggccaaggagacatg
gggggctggggaaacaactcattgaccttaggatcagaggtgtccaaatcttcagagctg
ttggaaagatgtgaaaccttggaaagaaaaacagtcacttttgagaacattgtctgtgtc
ttgaaccgggaggtggagagagtgtccatgacagctgaagcttgcagcaggcaacatcgc
ctagaccaggagaaaatcgaaactctgagtaccaaggtccagcagctggaaaggagtata
ggattgaaagacctggcaatggctgacatggaacagaagatccttgagatggaagcttct
acttatgatggaattttcatatggaagataactgactttgctagaaaacgccaggaagcc
atggctggtcgctctcctgccatcttctctccagccttctacacgagcaaatatggctat
aagatgtgtttgagaatttatctgaatggggatggcactggacgtgggacccacctttct
cttttctttgtcgtgatgaaaggaccaaatgatgcacttctacgttggccctttaaccaa
aaggtgacattaatgctgctagatcagaacaaccgggaacatgtgattgatgccttcagg
cctgacgtgacatcttcctctttccaaaggccagtcagtgatatgaacattgccagtggc
tgccccctcttctgtcctgtctccaaaatggagtcaaagaattcttatgtgcgcgatgac
gccattttcatcaaagccatcgttgatttgacgggtctttaa

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