Antechinus flavipes (yellow-footed antechinus): 127549124
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Entry
127549124 CDS
T08818
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04010
MAPK signaling pathway
afz04064
NF-kappa B signaling pathway
afz04071
Sphingolipid signaling pathway
afz04137
Mitophagy - animal
afz04141
Protein processing in endoplasmic reticulum
afz04210
Apoptosis
afz04217
Necroptosis
afz04380
Osteoclast differentiation
afz04621
NOD-like receptor signaling pathway
afz04622
RIG-I-like receptor signaling pathway
afz04657
IL-17 signaling pathway
afz04668
TNF signaling pathway
afz04920
Adipocytokine signaling pathway
afz04932
Non-alcoholic fatty liver disease
afz05010
Alzheimer disease
afz05014
Amyotrophic lateral sclerosis
afz05016
Huntington disease
afz05017
Spinocerebellar ataxia
afz05022
Pathways of neurodegeneration - multiple diseases
afz05132
Salmonella infection
afz05135
Yersinia infection
afz05160
Hepatitis C
afz05163
Human cytomegalovirus infection
afz05167
Kaposi sarcoma-associated herpesvirus infection
afz05168
Herpes simplex virus 1 infection
afz05169
Epstein-Barr virus infection
afz05170
Human immunodeficiency virus 1 infection
afz05200
Pathways in cancer
afz05203
Viral carcinogenesis
afz05222
Small cell lung cancer
afz05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127549124
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127549124
04064 NF-kappa B signaling pathway
127549124
04668 TNF signaling pathway
127549124
04071 Sphingolipid signaling pathway
127549124
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127549124
09143 Cell growth and death
04210 Apoptosis
127549124
04217 Necroptosis
127549124
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127549124
04622 RIG-I-like receptor signaling pathway
127549124
04657 IL-17 signaling pathway
127549124
09152 Endocrine system
04920 Adipocytokine signaling pathway
127549124
09158 Development and regeneration
04380 Osteoclast differentiation
127549124
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127549124
05203 Viral carcinogenesis
127549124
09162 Cancer: specific types
05222 Small cell lung cancer
127549124
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127549124
05160 Hepatitis C
127549124
05168 Herpes simplex virus 1 infection
127549124
05163 Human cytomegalovirus infection
127549124
05167 Kaposi sarcoma-associated herpesvirus infection
127549124
05169 Epstein-Barr virus infection
127549124
09171 Infectious disease: bacterial
05132 Salmonella infection
127549124
05135 Yersinia infection
127549124
09164 Neurodegenerative disease
05010 Alzheimer disease
127549124
05014 Amyotrophic lateral sclerosis
127549124
05016 Huntington disease
127549124
05017 Spinocerebellar ataxia
127549124
05022 Pathways of neurodegeneration - multiple diseases
127549124
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127549124
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
127549124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127549124
04121 Ubiquitin system [BR:
afz04121
]
127549124
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127549124
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127549124
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127549124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-RING_6
zf-C3HC4_4
zf-C3HC4_2
Thioredoxin_3
zf-RING_UBOX
MATH
Motif
Other DBs
NCBI-GeneID:
127549124
NCBI-ProteinID:
XP_051832904
LinkDB
All DBs
Position
2:complement(260248849..260315467)
Genome browser
AA seq
633 aa
AA seq
DB search
MDLDSGLLGHLPNSAANLLRDLGGVTAPLCSSVSPSVTMGRLFFNNRTFPSGEQRQPDTP
WSLISMGHGQKAAKVSLTTGQDPEQVVSDTGPVSPVLDQGLETHLGVVAHMATANSTPPG
SLDLLQPGFSKDILGTKLEDKYLCSACKNILRRPFQAQCGHRYCSYCLTSIISTGPQNCA
ACIQEGIYEEGISILESSSAFPDNAARREVESLPAICVNDDCTWKGTIKEYESCHEGHCP
FMLIECPACKWMIKLGEKEHHSERECPKRSLNCRYCKALFYYPDIKAHDEVCPKFPLTCE
GCGKKKILREKFQDHVKACGKCKGPCKFHVVGCTEMVENEKQQDHEIQKVAEHLCMLLNF
VLEARNFHGDIGPLLGQGDMGGWGNNSLTLGSEVSKSSELLERCETLERKTVTFENIVCV
LNREVERVSMTAEACSRQHRLDQEKIETLSTKVQQLERSIGLKDLAMADMEQKILEMEAS
TYDGIFIWKITDFARKRQEAMAGRSPAIFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLS
LFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSDMNIASG
CPLFCPVSKMESKNSYVRDDAIFIKAIVDLTGL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgattctgggctcctaggtcatcttcccaactctgctgccaatctcttgcgt
gatcttggtggagtcactgctcccctctgttcctcagtttctccgtctgtaacaatgggg
agattatttttcaacaacagaacatttccctcgggtgagcagagacagcctgatactccc
tggagcctgatatcaatgggacatggacaaaaggcagcaaaagtttctctgactactgga
caagaccctgaacaggtagtctctgatactggacctgtcagtccagttctggatcagggt
cttgaaactcatttgggggttgtagctcacatggcaacagcaaattctactcctccaggc
tctttagatttgcttcagcctggattttcaaaggatattctaggaacaaaactagaagat
aaatatctctgctctgcatgcaagaacattttgagaagaccatttcaagctcagtgtgga
catcgttactgctcttattgtttgaccagcatcataagcactgggcctcagaattgtgct
gcctgcattcaggagggaatatatgaagaaggcatttctattttagaaagtagttcggct
tttccagataatgctgctcgaagagaggtagaaagcctaccggctatctgtgtcaatgat
gattgcacatggaaaggcactataaaggaatatgagagctgccatgaaggacactgccca
ttcatgttaatcgagtgcccagcatgtaagtggatgatcaaactgggtgagaaggaacat
cattctgagcgggaatgcccaaagagaagcctcaactgcagatactgcaaagctcttttc
tactatcctgacattaaggcccatgatgaggtctgtcccaaatttcccttgacttgtgaa
ggctgtggtaagaaaaaaattcttcgagaaaaatttcaggaccatgtcaaggcctgtggc
aaatgcaaagggccctgcaaattccatgttgttggctgtaccgaaatggtggaaaatgag
aaacaacaggatcatgaaattcagaaagtggctgagcacctctgcatgttgttaaatttt
gtccttgaggctaggaacttccatggagatattggtcccctcctcggccaaggagacatg
gggggctggggaaacaactcattgaccttaggatcagaggtgtccaaatcttcagagctg
ttggaaagatgtgaaaccttggaaagaaaaacagtcacttttgagaacattgtctgtgtc
ttgaaccgggaggtggagagagtgtccatgacagctgaagcttgcagcaggcaacatcgc
ctagaccaggagaaaatcgaaactctgagtaccaaggtccagcagctggaaaggagtata
ggattgaaagacctggcaatggctgacatggaacagaagatccttgagatggaagcttct
acttatgatggaattttcatatggaagataactgactttgctagaaaacgccaggaagcc
atggctggtcgctctcctgccatcttctctccagccttctacacgagcaaatatggctat
aagatgtgtttgagaatttatctgaatggggatggcactggacgtgggacccacctttct
cttttctttgtcgtgatgaaaggaccaaatgatgcacttctacgttggccctttaaccaa
aaggtgacattaatgctgctagatcagaacaaccgggaacatgtgattgatgccttcagg
cctgacgtgacatcttcctctttccaaaggccagtcagtgatatgaacattgccagtggc
tgccccctcttctgtcctgtctccaaaatggagtcaaagaattcttatgtgcgcgatgac
gccattttcatcaaagccatcgttgatttgacgggtctttaa
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