Antechinus flavipes (yellow-footed antechinus): 127549506
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Entry
127549506 CDS
T08818
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz02010
ABC transporters
afz04146
Peroxisome
afz04977
Vitamin digestion and absorption
afz04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127549506
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127549506
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
127549506
04980 Cobalamin transport and metabolism
127549506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127549506
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afz02000
]
127549506
Enzymes [BR:
afz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
127549506
Membrane trafficking [BR:
afz04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
127549506
Transporters [BR:
afz02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
127549506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_29
RsgA_GTPase
nSTAND1
AAA_7
DEAD
NACHT
T2SSE
ATP-synt_ab
AAA_5
nSTAND3
FtsK_SpoIIIE
AAA_23
AAA_25
DUF6079
AAA_19
Motif
Other DBs
NCBI-GeneID:
127549506
NCBI-ProteinID:
XP_051833569
LinkDB
All DBs
Position
2:319211572..319243089
Genome browser
AA seq
606 aa
AA seq
DB search
MTPPRASRGNPDAAARPQVDLHFLQRFIKIQSILFPSFSSQNALMFLTLLCVTLLEQLVI
YQVGLIPSQYYGVLGNKDLDGFKTLTCLALVLIVINSTLKSFDQFICNLLYVNWRKNLTE
HLHCLYFRGRIYYTLNVIRDDIDNPDQRISQDVERFCRQLSTMASKLIISPFTISYYTYQ
CFQSTGWLGPVSIFGYFVLGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHVQLRVNAEPAA
FYRAGHVEHVRTNYRLQKLLQTQKELMSKELWLYIGINTFDYLGSILSYVVIAIPIFSGV
YGDLAPAELSALVSKNAFVSIYLIGCFSQLIDLSTTFSDVAGYTHRIGELQETLLDMSLK
PRDCDSEDLDEWDFDEASESKVTDTAFRLDRVSISVPSSDKPLIKDLSLTVSEGQSLLIT
GNTGTGKSSLLRVLAGLWESMHGTVQMMTSFGPHGVLFLPQRPFFTDGTLREQVIYPLKE
IYPVSGSADDERIMRFLELAGLSSLVARTGGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEVESELYRICQQLGMTLISVGHRQSLEKFHSSVLKLCGGGKWEL
IINKEE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccccgagggcatcacgggggaatcccgacgcagccgcgagaccccaggtagat
ttacattttctccaacgcttcataaagatacagtccatcttgtttcccagtttttcctca
cagaatgctttgatgttcctgacccttctctgtgtcactctgctggagcagctggtcatc
taccaggtggggctaataccaagtcaatactatggtgtcttaggaaacaaggatctggat
ggattcaagaccctgacatgtttagctcttgttctcatcgtgatcaactccacactgaag
agctttgaccagtttatctgtaacctgttgtatgtgaactggaggaagaaccttactgag
catcttcattgtctttacttccggggccgaatctactataccctcaacgtgattcgtgat
gacattgataatccggatcagcgtattagtcaagatgtagagagattctgtcgacagctc
agcaccatggccagcaagctgatcatctcccctttcaccatctcctactacacatatcag
tgctttcaaagtacaggctggcttggaccagtgagtatctttggttactttgtcctggga
accatagtgaacaaagtcctcatgagccctattgtttcaaagctggttcaacaggagaaa
ctggaaggagatttcaggtttaaacatgtgcagcttcgggtaaatgctgagccagcagct
ttctatagagctgggcatgtggaacatgtgaggacgaattacaggttgcagaaactcctg
cagactcagaaggaactcatgtccaaggaactttggctttatattggcatcaacacattc
gactacttgggcagcatcctgagctatgtggttattgcaatccccatcttcagcggtgtc
tatggcgacttggccccagcagaactaagtgccctggttagcaagaacgcctttgtgtcc
atttatctcatcggttgcttcagtcaacttattgacctctcaacaaccttctctgatgtg
gctggctatacacacagaattggggaattgcaagaaaccctgttggacatgtctttaaag
cctcgagactgtgattcagaagatttggatgaatgggattttgatgaggcctcagaatca
aaggtcactgacacagcctttcgcctggatcgggtctccatttcagtcccatcttctgac
aagcctctgatcaaggatctgagcctgacagtttctgaggggcagagcctgcttatcaca
gggaacacgggcactggcaaaagctccttgctcagggtcctggccggcttgtgggagagt
atgcatggtactgtacagatgatgacaagttttggacctcatggagtgttgtttctgcca
cagagacctttcttcacagatgggactttgcgtgagcaggtaatttatcctttgaaagaa
atctacccagtatcaggttctgctgatgatgaaagaatcatgaggttcttggaattagct
ggcctgtcaagtctggtggcaaggacagggggactggaccaacaggtagactggaactgg
tatgacgttttgtccccaggagagatgcaaagactttcttttgcccggctcttctatttg
caacctaaatatgcagtgttggacgaagccacaagcgctctcaccgaagaggtggagagt
gagctgtaccgcatctgccaacagctgggtatgacgctcatcagcgtgggacatcgacaa
agtctagagaagttccattcttcagttctgaaactttgtggaggaggaaaatgggaactt
atcatcaacaaagaagaatga
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