Antechinus flavipes (yellow-footed antechinus): 127554913
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Entry
127554913 CDS
T08818
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04022
cGMP-PKG signaling pathway
afz04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
127554913
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127554913
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127554913
Ion channels [BR:
afz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127554913
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
127554913
NCBI-ProteinID:
XP_051842813
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Position
3:complement(494718146..494870472)
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AA seq
903 aa
AA seq
DB search
MSQNSPYGPRRVCAPGTGTRRNESQDYLLIDSELCEDNSLQQPSGLPPYGYYPCIRGTDN
RLAHRRQTILREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEECL
SLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILN
HPAFAEGKRLATSPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKG
ARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYRGLASPAYLSLSSEDPVMTALELSN
ELAVLANIEKEFKNDYKRLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEASPNNGDHGRP
SLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTIAVKFLVVIAVAVGLPFLA
LIYWFAPCSRMGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNAK
QLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWSQGPKEYLFELWNMLDFGMLAIFAASF
IARFMAFWHASKAQSIIDANDTLKDLTSVGDNVKYYTLARIKWDPSDPQIISEGLYAIAV
VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYYGAK
QNEAFTTVEESFKTLFWAIFGLSEVKSVVINSNHKFIENTGYVLYGVYNVTMVIVLLNML
IAMINNSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKLKKW
ISQLFWGHKKGFEEDAEMNKLGHSKQSSIRSSEDLHLNSFNNPPRQYQKIMKRLIKRYVL
KAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIRKLGEKLSIEPNQEE
SNR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaactctccctatggccctcggagggtctgcgctcctggaaccgggactcgg
agaaatgagagtcaggactacctgctcatcgactcggagctttgtgaggacaactcccta
cagcagccctcgggtctgcctccctatgggtactatccctgcattcggggcactgacaac
agactggcccatcgtcgacaaaccatcctccgagagaaggggagaaggttagcaaatcga
ggaccagcatatatgttcaatgaccattcaacaagtctatccattgaggaggaacgcttt
ttagatgcagcagaatatggcaacattcctgtagtacgaaaaatgctagaagaatgcctt
tcacttaatgtgaactgtgtggattacatgggccagaatgctttgcagctggctgtggcc
aatgagcacctggaaattactgaacttttgcttaagaaagaaaatttgtcccgagttggg
gatgctttgctcttggccattagcaaaggttatgttcggattgtcgaagcaatcttaaat
catcctgcttttgctgagggcaagagactggcaacaagccctagccagtcagaactccag
catgatgacttttatgcctatgatgaagatggaacccggttctctcatgatgttaccccc
atcattctggctgctcactgccaggagtatgaaattgtgcacactcttttgaggaaagga
gcccgaattgaaagacctcatgattatttctgcaagtgtagtgaatgcaatcagaagcag
aaacatgactctttcagtcactcaagatccagaattaatgcttacagaggtctggcaagc
cctgcttatttgtcattgtctagtgaagatcctgtcatgacagccctagaactcagcaat
gagctggcagtgctggcaaacattgaaaaggaatttaagaatgactacaaaagattgtca
atgcagtgcaaagattttgttgtcggacttcttgatctttgcagaaatacagaagaagtg
gaggccattctgaatggagatgttgaagcgagccctaataatggtgatcatgggcgtcca
agccttagtcgtttaaaactcgctattaaatatgaagtcaaaaaattcgtagcccatcca
aactgccagcaacagcttctctccatttggtatgagaatctctcaggtttaaggcagcag
acaattgctgtcaaatttctagtggtcattgctgtggcagttggcttgcccttcctggca
ctgatttactggtttgctccatgcagtaggatggggaggataatgcgtggaccattcatg
aagtttgtagcacatgctgcctctttcaccattttcctgggacttctagtcatgaatgca
gctgacagatttgaaggcaccaaactcctccctaatgaaactagcacagataatgcaaaa
cagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatatcctgg
gtaataggaatgatatgggctgaatgtaaagaaatttggtcccaaggacctaaggaatat
ttgtttgagttatggaacatgctggattttggtatgttagccatttttgcagcatcattc
attgctaggttcatggcattttggcatgcttccaaagcccagagcatcatagatgcaaat
gatactttgaaagacctgacttctgtgggagacaatgtgaagtactacactttggccagg
ataaaatgggacccatctgatcctcaaatcatatctgaaggcctatatgccattgctgta
gttttaagtttctctagaattgcctacatcttaccagctaatgaaagctttgggcctcta
caaatatccttgggaagaaccgtaaaagacatcttcaaattcatggttatattcatcatg
gtatttgtggctttcatgatagggatgtttaacctctactcctattactatggagcaaag
caaaatgaagctttcacaacagttgaagaaagctttaagacattgttctgggctatattt
ggactctctgaagtgaaatccgttgtcataaactctaaccacaaattcattgagaatact
ggttatgttctttatggagtctataatgtgaccatggtcattgttttgctaaatatgctc
atagcaatgatcaataactcattccaggaaattgaggatgatgctgatgtggaatggaag
tttgcaagggctaaactttggttttcctactttgaagagggacgaacacttcctgttccc
ttcaacctggtaccaagtccaaagtccctgttctatctcttactcaaacttaaaaaatgg
atttctcagctgttttggggtcataaaaaagggtttgaggaagatgcagagatgaacaag
cttggtcacagtaagcaatcaagcataaggagctcagaagatttgcacctaaatagtttt
aataatcctcccagacaatatcagaaaataatgaagcggctcatcaaaagatatgttctg
aaagctcaaatagataaagaaagtgatgaagtcaatgaaggtgaactgaaggaaataaaa
caggacatctcaagtctccgctatgaacttcttgaggaaaaatcccagaatacagaagat
ctagcagaacttattagaaaacttggggagaaattatcaattgaaccaaatcaagaagaa
agcaatagataa
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