Antechinus flavipes (yellow-footed antechinus): 127560355
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Entry
127560355 CDS
T08818
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127560355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127560355
Spliceosome [BR:
afz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127560355
Complex C
U5 SnRNP specific factors
127560355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
127560355
NCBI-ProteinID:
XP_051850822
LinkDB
All DBs
Position
4:complement(140953554..140993146)
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGREAKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacctctatgatgagtttggaaattatattggaccagagctagattctgat
gaagatgatgatgaattgggtagagaagccaaagatcttgatgagatggatgatgatgat
gacgatgatgacataggagaccacgatgatgatcaccctgggatggaagtggtgttgcat
gaggacaagaaatactacccaactgctgaggaagtctatggccccgaggtagagacaatt
gtgcaagaagaagacactcagccactcacggagccgattattaaacctgtaaaaaccaag
aaattctctctgatggagcagacattaccggtcacagtgtatgaaatggatttcttggca
gacttgatggacaactcagaattgatcagaaatgtgactttatgtggacatctccaccat
ggcaaaacttgttttgtagactgtttaatagaacagactcatccagaaatcaggaagcgc
tatgaccaagatctctgctacacagacatcctcttcactgagcaagagaggggcgttggc
atcaaaagtactccagtgacagtagtcctgccagataccaaaggaaagtcttacctcttc
aacatcatggacacaccaggacatgtgaatttttctgatgaagtaacagctggcttgcgc
atctctgatggggtagtgcttttcatcgatgcagccgagggggtgatgctgaacactgag
cggctgatcaagcatgcagtgcaggagaggctggctgtcactgtgtgcatcaacaagatt
gaccggctgattctagagctcaaacttcccccaacagatgcctattacaaactgcgacac
attgtggatgaggtcaatggattaatcagcatgtattccactgatgaaaacctgatcctc
tctccacttctgggcaatgtctgcttttccagctcccaatacagcatctgcttcacattg
ggctcctttgccaagatctatgctgacacttttggtgacatcaattaccaagaatttgcg
aagaggctctggggtgacatttacttcaatcctaaaacgcggaaatttaccaaaaaggcc
ccaaccagcagctcccagcggagctttgtggaatttgtcttagagccactttataagatc
ttagctcaggttgtgggagatgtggacaccagtctcccgagaaccctggatgagctgggc
atccatctgaccaaagaggagctgaagctgaacatacgccctctccttagactggtctgc
aaaaagttctttggggagttcacaggctttgtagatatgtgtgtacagcatataccttct
cccaaggtgggcgccaagcccaagattgagcatacttacactgggggtgtagactcagac
cttggtgaggccatgagcgactgtgatcctgacgggcctctgatgtgccataccaccaag
atgtacagcactgatgatggggtacaattccatgcctttgggcgggtgctaagtggcacc
atccatgctgggcagcccgtgaaggtgcttggggaaaactatactttggaggatgaagag
gattcccagatctgtactgtgggccggctgtggatttctgttgccaggtaccacattgaa
gtgaaccgagttcctgcaggcaactgggttttgattgagggtgtggatcaacccattgta
aagactgcaactatcactgagccccgaggcaacgaggaggcacagatcttccggccttta
aagttcaatactacttcagtcatcaagattgctgtggaaccagtcaatccctccgagcta
cccaagatgctggatggcctgcgtaaggtcaacaagagctatccatccctcactactaag
gtggaagaatctggggaacatgtgatcctgggcactggggagctgtacctggactgtgtg
atgcatgacttacggaagatgtactcagagatagacatcaaggtggctgatcctgttgtc
acattttgtgagacagtggtagaaacttcttccctcaagtgttttgctgaaacacccaat
aaaaaaaacaaaatcaccatgattgctgaacctcttgagaagggtctagcagaggacata
gagaatgaagtggtacagatcacttggaacaggaagaagctaggagagttcttccagaca
aaatatgactgggatttgctggctgctcgttccatctgggcctttggccctgacgccact
ggccccaacatcctagtggatgatactttgccctcagaggtggataaagctttgctggga
tcagtgaaggatagcattgtccaaggtttccagtggggtaccagagaaggacccctctgt
gatgagttgattcgcaatgtgaagttcaagatccttgatgcagtcgttgcccaagaacca
ctgcaccggggaggaggccagatcattcccaccgccaggagggttgtctattctgccttc
cttatggctactcctcgtctaatggagccttactactttgtggaagttcaagcccctgca
gactgtgtctctgcagtctacacagtcttggccaggcgcagaggccatgtgacacaggat
gcacctatcccaggctctccactctacaccatcaaagccttcatcccagctattgactca
tttgggtttgaaactgatctccggacccacacccagggacaagccttctctttgtctgtt
ttccaccactggcagattgtacctggtgacccattggataaaagcattgtcattcgtccc
cttgagccacagccagcccctcacttggcccgggagttcatgatcaaaacccgtcgtaga
aagggtctgagtgaggatgtaagtatcagcaagttcttcgatgatcctatgttgttggag
ctggccaagcaggatgtggttctcaactaccccatgtga
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