Antechinus flavipes (yellow-footed antechinus): 127560411
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Entry
127560411 CDS
T08818
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127560411
Ion channels [BR:
afz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127560411
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
FUT8_N_cat
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
127560411
NCBI-ProteinID:
XP_051850926
LinkDB
All DBs
Position
4:complement(146090876..146183570)
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AA seq
1677 aa
AA seq
DB search
MITILANCVFMTMSEPPPWSKNVEYTFTGIYTFESLIKMLSRGFCIDDFTFLRDPWNWLD
FSVIMMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILT
VFCLSVFALVGLQLFMGNLRQKCVKWPPPISDINETWYDNGTALFSNDTGFGNDTLYSNF
TFDWDAYINDEGNFYFLDGANDALLCGNSSDAGHCPEGYECMKAGRNPNYGYTSYDTFSW
AFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQN
DATLAEEQEKEEEFQQMLEKLKKHQEEQEKLAQAALESGEGDGDQIQGKDCNGGLDTGES
QRRPSQNPQRQSCSMDSAVSDAMEELEEAHQKCPPWWYKCAHTLLVWNCCAPWVKLKKIL
HLIVMDPFVDLGITICIVLNTLFMAMEHYPMTPEFEHVLTVGNLVFTGIFTAEMVLKLIA
MDPYEYFQQGWNIFDSFIVTLSLVELGLSNVQGLSVLRSFRLMRVFKLAKSWPTLNMLIK
IIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKIDASCSLPRWHMHDFFHSF
LIVFRILCGEWIETMWDCMEVAGQPMCLTVFLMVMVIGNLVVLNLFLALLLSSFSADSLA
ASDEDGEMNNLQIAIGRITWGIDYAKAFILALLHGQILAPGDMKTEKAEEGEGGEEEKKE
QQQQQQQEEEEDLKKDNHILNHIDVVECPPTSIELDHMNFINNPYLTVQVPIASEESDLE
MPTEEETDTFSEAEEIKKPPPPKCDGNSSVCSTADYKPPEEEEQPQEEENPEGELPEECF
TEACVKRFPFLYVDITSDRGKIWWNLRKACFRMVEHNWFETFIVFMILLSSGALAFEDIY
IEQRKVIRTILEYADKVFSYVFVLEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVA
NWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIF
SIMGVNLFAGKYYRCINTTTSEIFDISEVNNKSDCFKLMDTGEVRWVNVKVNFDNVGLGY
LSLLQVATFKGWMDIMYAAVDSREIEEQPQYEVNIYMYIYFVFFIIFGAFFTLNLFIGVI
IDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQM
FDIMIMFLICLNMVTMMVETDDQSQLKIDILYNINMVFIIIFTGECVLKMVALRHYYFTV
GWNIFDFVVVILSIAGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFA
LMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITT
SAGWDGLLNPILNSGPPDCDPELENPGSSVKGDCGNPSIGICFFCSYIIISFLIVVNMYI
AIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIAYSRLSDFVDTLQEPLKIA
KPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKQTMEEKFMAANPSKVS
YEPITTTLKRKQEEVCAVKIQRAYRRHLLRRSMKQASYLYRHSGDSSGFEAPEKEGLIAD
AMNKMYGNNSSQKEEDKAKGEAGPALGLMPIDAPNSSQPSPEPQGQGVRPGVKESLV
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccatcctggcaaactgtgtattcatgaccatgagtgaacccccaccctggtct
aaaaacgtggagtacacctttacaggaatctacacttttgagtctctcatcaagatgctc
tctcgaggcttctgcattgatgacttcacatttctccgagacccctggaattggctagac
ttcagtgtcatcatgatggcgtacctgacagaatttgtggatatgggcaacatctcagcc
ctgagaaccttccgtgtgcttcgagccctgaagactataacagtcattccaggactgaag
acaattgtaggggcactgatccagtccgtgaagaagctgtcagatgtgatgattctcaca
gtcttttgcctgagtgtttttgccttagttgggctacagctcttcatggggaatctcagg
caaaagtgtgtgaaatggccacccccaatcagtgatatcaatgagacttggtatgacaac
gggacagccttgttcagcaatgacacaggttttggtaatgacacgttatacagcaacttt
acctttgactgggatgcctacatcaatgatgaagggaacttctatttcctggatggtgcc
aatgatgccctgctctgtggaaatagcagtgatgcagggcactgccctgagggctatgag
tgcatgaaggctggccggaatcccaactatggctacaccagttacgacaccttcagctgg
gcctttcttgccctcttccgactcatgacacaagactactgggagaacctcttccagctg
acccttcgagcggctggcaagacctacatgatcttctttgtagtcatcatcttcctgggc
tccttctatctcatcaacctcatcctggcggtagtagcaatggcctacgcagaacagaat
gatgctaccctggcagaggagcaagagaaggaggaggagttccagcagatgctagaaaaa
ctcaagaagcatcaggaggaacaggagaaactggctcaagcggccctggagagtggtgag
ggggatggagaccagatccaggggaaggactgcaatggcggactggatacaggagagtcc
caaaggagaccttcccagaacccccaaagacaaagctgcagcatggacagtgccgtctcg
gatgccatggaagagttggaggaggcccatcagaagtgcccgccatggtggtacaagtgt
gcccatacattgttggtgtggaattgctgtgctccgtgggtgaagctaaagaagattttg
cacctgattgtcatggacccctttgtggacttgggcatcaccatctgcattgtgctcaac
accctcttcatggccatggagcactaccccatgactcccgagtttgagcatgtgctcact
gtgggcaatctggttttcacaggcatcttcactgcagagatggtgctgaaactgattgcg
atggatccctatgagtacttccaacaaggatggaacatctttgacagttttattgtcacc
ttgagcttggtagagctggggctgtccaatgtgcaagggctgtctgtacttcggtccttc
cgcttgatgagagtcttcaaactggccaaatcctggcccacactgaatatgctcatcaag
atcattggcaactctgtgggagctttggggaacctgacgttggtgttggctatcattgtc
ttcatcttcgctgtggtgggcatgcaactctttgggaagaactacaaggaatgcgtgtgt
aagattgatgccagctgcagcctgccccgctggcacatgcatgacttcttccactccttt
ctcattgtcttccgaatactgtgtggcgagtggatcgagaccatgtgggattgtatggag
gtggctggtcagcccatgtgtctcactgtcttcctcatggtcatggtcattggaaacctt
gtggttctgaatctgttccttgccctgctcctgagctccttcagtgctgacagcctggca
gcctctgacgaagatggggagatgaacaaccttcaaattgccattggacgtatcacctgg
ggcattgattatgccaaagccttcatcctggctctcctacatggtcagatcctggctcct
ggggacatgaagactgagaaggctgaggagggggaaggtggcgaagaagagaagaaggaa
cagcaacagcagcagcagcaagaggaagaggaagatttaaaaaaggacaatcacattctg
aaccacattgatgtggtagaatgcccaccaaccagtattgaacttgaccacatgaacttt
atcaacaatccatacctgacagtacaggtgcccatcgcttctgaggagtctgacctagag
atgcccacagaggaggaaacggacacattttctgaggctgaagagatcaagaagccacca
cccccaaagtgtgatgggaactcctcagtatgcagcacagctgactacaaaccacctgag
gaagaagagcagccccaagaagaggaaaaccctgaaggagagctccctgaggagtgtttc
actgaggcttgtgtaaagagattccctttcctctatgtggacatcacctcagatcggggg
aaaatatggtggaaccttcgaaaggcttgcttcaggatggtggaacacaactggtttgag
acattcattgtgttcatgattctacttagcagtggggccttagcattcgaagacatctac
attgaacaacggaaggtgatccgaacgatcctagagtatgcggacaaggtcttctcctat
gtatttgtcttggagatgctgctcaagtgggtggcttatggctttaaagtgtattttacc
aacgcctggtgctggcttgacttcctcattgtagatgtctccatcatcagcctggtagcc
aactggttgggctactctgaacttggtgccatcaagtcactcaggacacttcgggccctt
agaccactccgggccctgtccagatttgaaggcatgagggtggtggtgaacgccctcctg
ggtgccatcccttccatcatgaatgtgttgctcgtttgcctgatcttctggctcatcttc
agcatcatgggtgtcaacttgtttgcggggaagtattaccgatgcatcaatactaccacc
tcggaaatttttgacatctctgaagtcaacaacaagtcagattgcttcaaactgatggac
acaggggaggttcgatgggtcaatgtcaaagtcaactttgacaatgtgggccttggctac
ctctcactcctgcaggtggctactttcaagggctggatggacatcatgtatgcagctgtg
gattctcgagagattgaagaacaaccccagtatgaagtgaatatttatatgtacatctac
ttcgtcttctttatcatctttggagcattcttcaccctcaatctcttcattggagtcatc
attgacaacttcaatcagcaaaaaaagaagtttggaggaaaggacatcttcatgacagag
gaacagaagaaatattataatgccatgaaaaaactgggctccaagaagccgcagaagcca
attcctcgacctcagaacaagattcagggcatggtgtatgactttgtgaccaagcagatg
tttgacatcatgatcatgttcttgatctgtctcaacatggtcaccatgatggtggagaca
gatgaccagagccagctcaagattgacatcctttacaacatcaacatggtcttcatcatc
atcttcacgggcgagtgtgtgctcaagatggtagcactgcgtcattactacttcactgtt
ggctggaacatttttgactttgtggtggtgatcctctccattgcgggtcttgccctttct
gacttgatccagaaatactttgtttcacccactctgttccgagtaattcgtctggctcgg
atagggcgcgtcctgaggctgatccgaggtgccaagggtatccggaccttgctcttcgcc
ctcatgatgtctctccctgccctcttcaacattggtctgctcctcttcctcgtcatgttc
atctactccatctttggcatgtccaactttgcctatgtgaagaaagagtctggcatcgat
gacattttcaactttgagacctttggcaacagcatcatttgccttttccagatcaccacc
tcagctggctgggatgggcttctgaatcccatccttaacagtgggccccctgactgtgat
cctgagctggagaacccaggcagcagcgtcaaaggtgattgtggcaatccttccatcggc
atctgcttcttctgtagctacatcatcatctccttcctcattgttgtcaacatgtacatc
gccatcattctggagaacttcaatgtggccactgaggagagcagtgagccactgggggaa
gatgactttgagatgttctatgagacatgggaaaagtttgacccagatgccacacaattc
attgcctacagtcgcctctctgactttgtggacaccctacaggagcctctgaagatcgcc
aaacccaacaagatcaaactcatcactctggatctgcctatggtccctggagacaagatc
cactgcctcgatatactctttgctctaactaaagaggttctaggagactccggtgagatg
gatgccctcaagcagaccatggaggagaagttcatggcagccaacccatccaaggtctcc
tatgaacccatcaccactacactgaaaaggaagcaggaagaggtatgtgctgtgaaaatc
caaagagcctaccgccgacatttacttaggcgttcaatgaagcaagcctcttatctctat
cggcatagcggagatagcagcgggtttgaggctccagagaaggaggggctgattgccgat
gccatgaacaagatgtatgggaataacagctcccagaaagaagaagacaaagcaaaaggg
gaggctggtcctgccctgggtctcatgcccattgatgccccaaactcaagccagccatcc
ccagaaccacaggggcaaggagtccgcccaggggtcaaggagtcacttgtctaa
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