KEGG   Antechinus flavipes (yellow-footed antechinus): 127564449
Entry
127564449         CDS       T08818                                 
Name
(RefSeq) T-cell surface glycoprotein CD4 isoform X1
  KO
K06454  T-cell surface glycoprotein CD4
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03250  Viral life cycle - HIV-1
afz03260  Virion - Human immunodeficiency virus
afz04060  Cytokine-cytokine receptor interaction
afz04514  Cell adhesion molecules
afz04612  Antigen processing and presentation
afz04640  Hematopoietic cell lineage
afz04658  Th1 and Th2 cell differentiation
afz04659  Th17 cell differentiation
afz04660  T cell receptor signaling pathway
afz05135  Yersinia infection
afz05166  Human T-cell leukemia virus 1 infection
afz05170  Human immunodeficiency virus 1 infection
afz05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
afz05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127564449
   03260 Virion - Human immunodeficiency virus
    127564449
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    127564449
   04514 Cell adhesion molecules
    127564449
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    127564449
   04612 Antigen processing and presentation
    127564449
   04660 T cell receptor signaling pathway
    127564449
   04658 Th1 and Th2 cell differentiation
    127564449
   04659 Th17 cell differentiation
    127564449
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    127564449
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    127564449
   05170 Human immunodeficiency virus 1 infection
    127564449
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    127564449
  09163 Immune disease
   05340 Primary immunodeficiency
    127564449
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:afz04090]
    127564449
CD molecules [BR:afz04090]
 Proteins
  127564449
SSDB
Motif
Pfam: CD4-extracel Ig_3 ig Tcell_CD4_C V-set Ig_2 C2-set I-set Receptor_2B4 Ig_6 TM_ErbB1
Other DBs
NCBI-GeneID: 127564449
NCBI-ProteinID: XP_051856935
LinkDB
Position
5:187964504..187998554
AA seq 485 aa
MTLAPFRGGLAPHFLHKASMDGGTSFATLLLALQLVLLPAMTSEKELILGEAGDQVKLPC
KASKKENMDFTWKQPDQLVILRGFRRSSPPRVIGNTKMKDRVDSSSNEWDSGNFSLIIKK
LEIADSGTYFCEVENRKQEVQLWVFKLTANPSDYIFSGKNMTLTLHSSSNLPGFKVEWNG
PGDKSKRILSRDKKTLNLIHVEPKEGGIWYCAISVNGKTLKLSIRVTVFGFTKPSQTKYG
MTGKTVQFSFPLNLNEQELNKEDPKGEFTWQVEDVASPQQPAKYSWKDNNLIPGSGIPNF
KVEKSNFPITFTLSPVLPQHAGSGIFLLKFSSGDLKQKVNLVVMRAISQESPHKKLCCDV
LGPIIPGLNLRWVLENRTEINLNVSEKQRELQVDKPKSGTWECQLFLQDKKQLNSDSFKL
TAKQEWYLPFYLGTGLGAGASLLLLFGLSTFCYVRRRHRLRRAERMSQIRRLLSEKKTCQ
CPHHF
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgactctagcacctttcagaggaggtctggcacctcatttccttcacaaggcgagtatg
gatggaggaacttcctttgcaaccttgctcctggctctgcagttggttctattgcctgcc
atgaccagtgaaaaggagctgattctgggtgaggctggggatcaggtcaaattgccttgc
aaggcttcaaagaaagaaaatatggactttacttggaaacaaccggaccaacttgttatt
ctcaggggcttcagaagaagttcaccaccaagggttataggaaacacaaaaatgaaagat
agagtggattcctcatcaaatgaatgggactcgggcaacttttctctgatcatcaagaag
ctggagatagcagactctgggacctatttctgtgaggtagagaacaggaagcaggaagtc
caactttgggtgttcaagttgacggccaacccaagtgattatatattttctggaaagaac
atgactttaacattacatagctcctccaaccttcctggattcaaggtggaatggaatggt
ccaggagataaaagtaaaaggatcctgagtcgagacaagaaaactttgaacttaatccac
gtggagcctaaagaaggaggtatttggtactgtgctatctctgtgaatggcaaaaccctg
aaattgagcatcagagtcacagtatttggtttcacaaaaccatcccagaccaaatatggg
atgacaggcaaaactgtccaattctccttccctctgaatttaaatgagcaggagctgaat
aaggaagatccaaaaggagaattcacatggcaggtggaagatgttgcctctccccaacag
ccagccaagtattcatggaaggataataatttgatacctggaagtgggattccaaatttc
aaagtggagaagtctaattttccaatcacattcactctttcccctgtcttgccccagcat
gctggctcaggaatcttcctactaaaattttcttcgggagacctgaaacagaaggtcaac
cttgtggtaatgagagctatatcccaggaatcaccacataagaaactgtgctgtgatgtg
ctgggccccataatccctgggctgaacctgagatgggtgctagaaaaccggacagaaata
aacctgaatgtttcagagaagcaaagggagctgcaggtggacaaaccaaaatctgggaca
tgggaatgccaattgttcctccaagataagaaacaacttaattcagattccttcaaattg
acagcaaagcaggagtggtatctccccttttatctgggcactggactgggtgcaggagca
agcctgctgcttctctttgggctctctaccttctgttatgtcagacgaagacacaggctg
cgccgagcagagcggatgtctcagatcaggagacttctgagtgagaaaaagacctgccag
tgtccccatcatttttag

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