Agathobaculum sp. NTUH-O15-33: RWV98_04180
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Entry
RWV98_04180 CDS
T09495
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat01501
beta-Lactam resistance
agat01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RWV98_04180
01503 Cationic antimicrobial peptide (CAMP) resistance
RWV98_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agat03036
]
RWV98_04180
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agat02000
]
RWV98_04180
01504 Antimicrobial resistance genes [BR:
agat01504
]
RWV98_04180
Chromosome and associated proteins [BR:
agat03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RWV98_04180
Transporters [BR:
agat02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RWV98_04180
Antimicrobial resistance genes [BR:
agat01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RWV98_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
Biotin_lipoyl_2
RnfC_N
OEP
Motif
Other DBs
NCBI-ProteinID:
WNX85480
LinkDB
All DBs
Position
complement(790078..791379)
Genome browser
AA seq
433 aa
AA seq
DB search
MIGQQAKRLLAGAVSMALIGTLAGCGPSMPETVKSSTPVETETVSVSSISTRNQLSGKVV
PQNAVSLFAPQQSDVLTVDVAVGDRVTIGKTLFTLDAVSIQRDIQQVEGERSRTASLYDQ
QISQAQQQLETTRTLQNEQVRQAKQSWENTQALFEQEAASQIELEQAEAKYNEVKLSAED
TIYAAELSVTKLQTEKANQLATYDKSLAELRDSKGDMSVKSTVSGTVTEVNVVKGGKANT
QTAAVVIATDETPQVSLSVSETIQPWLEIGDVVTVEISALGGQPITATIASVAPAVNEQT
HLYDVLLDLPKDTGAAYGMFATVTIYTDVREDVVVIPTDAIQTDSTSQYIFIVEYDDTVT
RIDIESGLVGDGVTQVTNGLTGGEDLVVAGQSYLTEGAEVRVVKRDGVDLTEQPAEPEDA
PAEAEPAEMEVPE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgataggacaacaggcaaaacgcttgctcgcgggagcggtatccatggcgctgatcggc
acgctggcgggctgcgggcccagcatgcccgaaaccgtaaaatccagcacgccggtggag
accgaaacggtcagcgtttcgagtatctccacccgcaaccagctttccggcaaggtcgtg
ccgcagaacgcggtctcgcttttcgccccgcagcaaagcgacgtgctgacagtcgatgta
gcggtgggcgaccgggtgacgatcggcaaaacgctcttcacgctggacgcggtatccatc
cagcgcgatatccagcaggtcgagggcgaacgcagccgcacggcttccctttacgatcag
cagatctcgcaggcgcagcagcagctcgagaccacgcgcaccctgcaaaatgaacaggtg
cggcaggccaagcaaagctgggaaaacacgcaggcgctgtttgaacaggaagcggcttcg
cagatcgagctggaacaagctgaggccaagtataacgaggtaaagctcagcgcggaggac
accatctacgccgccgagctgtccgttaccaagctgcagaccgaaaaggcgaaccaactc
gccacctacgacaaatcgcttgccgagctgcgcgacagcaagggcgatatgtcggtcaaa
tccacggtctcaggcacggtgaccgaggtgaacgtcgtaaagggcggcaaagcgaatacg
cagaccgccgccgtcgtcattgcgaccgatgaaacgccgcaggtctccctttcggtttcc
gaaacaatccagccgtggctggagatcggcgacgtggtcacggtagagatctccgccctt
ggcggccagccaatcacggcgacgatcgcctcggtcgcgcccgcggtaaacgagcagact
cacctgtacgacgtgctgcttgacttgcctaaggataccggcgccgcctacggcatgttt
gcgactgtcacgatctatacggacgtgcgcgaagacgtggtggtcatcccgaccgacgcg
atccagaccgacagcacctcgcagtacatattcatcgtcgagtatgacgatacggtcacc
cggatcgatatcgagagcggtctggtgggcgacggcgtgacgcaggtcacaaacgggctg
accggcggcgaggatttggtggtagccggacaaagctatctgaccgaaggcgcggaggtg
cgcgtggtcaaacgggatggcgtggatctgaccgagcagcccgctgaaccggaagacgca
cccgccgaagccgaacccgcagagatggaggttccggaatga
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