Agrobacterium sp. RAC06: BSY240_3116
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Entry
BSY240_3116 CDS
T04501
Symbol
mdh
Name
(GenBank) malate dehydrogenase, NAD-dependent
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc00020
Citrate cycle (TCA cycle)
agc00270
Cysteine and methionine metabolism
agc00620
Pyruvate metabolism
agc00630
Glyoxylate and dicarboxylate metabolism
agc00680
Methane metabolism
agc00710
Carbon fixation by Calvin cycle
agc00720
Other carbon fixation pathways
agc01100
Metabolic pathways
agc01110
Biosynthesis of secondary metabolites
agc01120
Microbial metabolism in diverse environments
agc01200
Carbon metabolism
Module
agc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agc_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BSY240_3116 (mdh)
00620 Pyruvate metabolism
BSY240_3116 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
BSY240_3116 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
BSY240_3116 (mdh)
00720 Other carbon fixation pathways
BSY240_3116 (mdh)
00680 Methane metabolism
BSY240_3116 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
BSY240_3116 (mdh)
Enzymes [BR:
agc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
BSY240_3116 (mdh)
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GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
AOG08693
UniProt:
A0AAI8D0W4
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All DBs
Position
3205514..3206476
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AA seq
320 aa
AA seq
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MARKKIALIGSGMIGGTLAHLASLKELGDIVLFDIADGIPQGKGLDIAQSGPVEGFNAKL
SGASDYAAIEGADVCIVTAGVARKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPTNKVVGMAGVLDSGRFRHFLSEEFNVSVQDVTAFVLGGHGDTM
VPLARYSTVGGIPLTDLVKMGWVTKERLEEIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESYLKDKKRVLPCAAYLTGQYGVKDMYVGVPVVIGEGGVERIIEIDLNKAEEEAFQK
SVGAVAGLCEACINIAPALK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaagatcgctcttatcggttctggaatgattggtggaacgctggcgcat
ctcgccagtttgaaggaactgggcgacatcgtcctgttcgacattgctgacggcatcccc
cagggcaagggtctcgacattgcccagtccggtccggtcgagggcttcaatgccaagctt
tccggcgcgagcgattacgccgccatcgaaggtgctgacgtctgcatcgtgactgccggt
gttgcccgcaagccgggcatgagccgcgatgacctgctcggtatcaacctcaaggtcatg
gaacaggttggcgccggcatcaagaagtatgccccgaacgccttcgtcatctgcatcacc
aacccgctcgacgcgatggtctgggccctgcagaagttctcgggcctcccgaccaacaag
gtcgtcggcatggccggcgttctcgactctggtcgtttccgccacttcctgtctgaagaa
ttcaacgtttccgtccaggacgtcaccgccttcgtactcggcggccacggcgacaccatg
gtgccgctcgctcgttactcgaccgttggcggcatcccgctgaccgacctcgtgaagatg
ggctgggtcaccaaggaacgcctcgaagaaatcatccagcgcacccgtgacggtggcgcc
gaaatcgtcggtctgctgaagaccggctcggcctactatgcaccggctgcttccgccatc
gaaatggccgagtcctacctcaaggacaagaagcgcgttctgccctgcgccgcctacctc
accggccagtacggcgtgaaggacatgtatgtcggcgtaccggtcgtcatcggtgaaggc
ggcgtcgagcgcatcatcgaaatcgacctgaacaaggccgaagaagaagccttccagaag
tctgtcggcgccgttgccggcctctgcgaagcctgcatcaacatcgcgccggctctcaag
taa
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