Arthrobacter gengyunqii: MUG94_05200
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Entry
MUG94_05200 CDS
T08980
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ageg
Arthrobacter gengyunqii
Pathway
ageg03030
DNA replication
ageg03410
Base excision repair
ageg03420
Nucleotide excision repair
ageg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ageg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUG94_05200 (ligA)
03410 Base excision repair
MUG94_05200 (ligA)
03420 Nucleotide excision repair
MUG94_05200 (ligA)
03430 Mismatch repair
MUG94_05200 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ageg03032
]
MUG94_05200 (ligA)
03400 DNA repair and recombination proteins [BR:
ageg03400
]
MUG94_05200 (ligA)
Enzymes [BR:
ageg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MUG94_05200 (ligA)
DNA replication proteins [BR:
ageg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MUG94_05200 (ligA)
DNA repair and recombination proteins [BR:
ageg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MUG94_05200 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUG94_05200 (ligA)
MMR (mismatch excision repair)
DNA ligase
MUG94_05200 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUG94_05200 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
zf-TFIIB
DNA_meth_N
Motif
Other DBs
NCBI-ProteinID:
UOY97789
LinkDB
All DBs
Position
1147864..1150089
Genome browser
AA seq
741 aa
AA seq
DB search
MASVSTDTPPSDNLRGEYQSLADQVRKYRFAYYNEDAPLVSDAEFDQLYRRLEELEALHP
ELVSNDSPTQEVGGEISAAFTPVEHLQRMYSLEDVFSLDELDAWVRKAEASVANIAPGEK
IKWLTELKIDGLAVNLLYRNGELVRAATRGDGTTGEDITHNVLTIKSIPRVLTGENIPAE
MEIRGEVFIPSKEFARLNESMVEAGKAPFANPRNAAAGSLRQKDPEVTARRPLSMYVHGI
GAREGLSAASQSETYELLKEWGLPTSPYYKVLDSYDEVLNYIAVNGEHRHDLSHEIDGIV
VKVDDFALQRALGHTSRVPRWSVAYKYPPEEVNTKLLDIRVNVGRTGRVTPYGMMTPVSV
SGSTVEMATLHNQDVVKAKGVKIGDTVVLRKAGDVIPEIVGPVVALRDGSERDFVMPTHC
PSCGTELKPAKEGDVDIRCPNAKSCPSQLRERVFHLAGRGAFDIEALGWEAAIALTQPTE
PETPPLTSEAGLFDLKVEDLADVRIERPKRVKGVVDGTELVPYFYSKGTAKKPSEPTATT
RKLFTELEKAKTQPLWRVLVALSIRHVGPTAARALATAFGSMDAIRAASEEQLAHVDGVG
PTIAAALTEWFAEDWHREIVDRWAAAGVRMADERDETMPRTLEGMTIVVTGTLPNFSRDE
AKEAIITRGGKASGSISKKTDYLVAGENAGTKLDKAESLGVPVLDEDGFRRLLDGTLLEE
ETAQEEGQLQEEGTLQEEGTA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtggcttccgtgagcacggacactccgcccagtgacaatctgcgcggggaataccagagc
ctagcggaccaggtgcggaagtaccgttttgcgtactacaacgaagatgccccgctcgtc
tctgatgcggagttcgaccagctgtaccgccggctcgaagaactcgaagccctgcatccg
gaactggtcagcaacgattcacccacgcaggaagtgggcggggagatctccgcagcgttc
acaccggtggagcatcttcagcgcatgtacagcctggaggatgtcttttcgctggatgag
ctggacgcctgggtccgcaaggccgaagcctccgtggccaacatagctccgggggagaag
atcaagtggctgaccgaactgaagattgacgggctggcggtcaacctcctctaccgcaac
ggcgagctggtccgggcggccacccgcggcgacggcaccacgggtgaggacatcacccac
aatgtgctcaccatcaagtccatcccgcgggtccttacgggcgagaacatccccgcagaa
atggaaatccgcggggaggtcttcatcccctccaaggagtttgcccgcctgaacgagtcc
atggtcgaagccggaaaggcgccgtttgcgaacccccgcaacgccgcagccggatcgctg
aggcagaaggatcccgaagttactgcccggcgcccgctgagcatgtatgttcacggcatc
ggcgcccgtgagggattgtcggcagccagccaatccgaaacgtacgagctgctaaaagag
tggggcctgccgacgtcgccgtattacaaggtcctcgacagctatgacgaggtgctcaac
tacatcgccgtgaacggggagcaccgccacgatctgtcgcacgagatcgacggcattgtg
gtcaaggtcgatgattttgccctgcagcgcgccctcgggcacacgtcgcgggtgccgcgc
tggtcggttgcctacaagtacccgccggaggaagtgaacaccaaactgctggacatccgg
gtcaatgtgggccgcaccggccgcgtcacgccctacgggatgatgacgccggtctccgtc
tccggctccaccgtggaaatggcgacgctgcacaaccaggacgtggtcaaggccaagggc
gtcaagatcggcgacaccgtggtgctgcgcaaggccggtgacgtgatcccggaaatcgtg
ggccccgtcgtcgccctccgtgacggcagcgaacgggacttcgtaatgcccacccactgt
ccctcctgcggcacggaactgaaaccggccaaggaaggggacgtggatatccgctgcccc
aacgcgaaatcctgcccgtcgcagctgcgcgagcgtgtgttccatctggccggccgcggt
gccttcgatattgaggcgctcggctgggaggcggcgattgccctgacgcagcccactgag
ccggaaaccccgccgctgaccagtgaggccggcctgtttgacctcaaggtcgaggatctc
gccgacgtgcggatcgaacggcccaagcgcgtgaagggggtggtggacggcaccgaattg
gttccctacttctactccaagggcacggccaagaagccctccgaacccaccgccaccacc
cgcaagctctttaccgaactcgagaaggccaagacccagccgttgtggcgggtgctggtg
gcgctgtccatccggcatgtgggcccgacggcggcccgcgcgctggccaccgcgtttggc
tccatggacgccatccgcgctgcatcggaagagcagctggcccatgtcgacggcgtgggc
cccacgattgcggccgccctgacggaatggtttgccgaggactggcaccgcgagatcgtg
gaccgctgggccgccgccggcgtgcggatggccgacgagcgcgacgaaacgatgccccgc
acccttgaaggcatgaccattgtggtgaccggaaccctgccgaacttcagccgcgacgag
gccaaggaagccatcatcacccgcggcggaaaagcttccggatcaatctccaagaaaacc
gactacctggtggcgggggagaacgccggcaccaagctggacaaggcggagtccctcgga
gttcccgtgctggatgaagacggattccgcaggctgctggacggcacgctcctggaagaa
gaaacagctcaggaagaaggccagctgcaggaagaaggcacgctgcaggaagaaggcacg
gcatga
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