Accipiter gentilis (Northern goshawk): 126036296
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Entry
126036296 CDS
T08649
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
agen
Accipiter gentilis (Northern goshawk)
Pathway
agen04622
RIG-I-like receptor signaling pathway
agen04623
Cytosolic DNA-sensing pathway
agen05164
Influenza A
agen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
126036296
04623 Cytosolic DNA-sensing pathway
126036296
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
126036296
05168 Herpes simplex virus 1 infection
126036296
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
agen04054
]
126036296
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126036296
Pattern recognition receptors [BR:
agen04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
126036296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
126036296
NCBI-ProteinID:
XP_049651836
LinkDB
All DBs
Position
Z:complement(18170526..18199463)
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AA seq
928 aa
AA seq
DB search
MTAEEKRSLQCYRRYIEKSLNPVYILGNMTDWLSDEVKERVRKEEEKGVTAAAALFLDAI
LQLEAEGWLRGFLDALVAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLEVDPVA
LMPYINMCLIERECEEILQVSEYRSKAAGITKLIECLCRSDKENWPKSLQLALDNTGYYN
ASELWDIREDNGKDVDGEMTDACENSFETVVTFSEEAECDNNLSENLCSASEGIYQSSRV
YEPKKARSYQTELAQPAINGKNTLICAPTGSGKTFVAILICEHHFQNMPSGQKAKVVFLA
TKVPVYEQQKTVFKQHFERSGYSVQGISGETVANVSVEKVIQDSDIIVLTPQILVNSIEE
GILGSLSIFTLMIFDECHNTTGNHPYNVLMSRYLEQKFDSASQLPQIVGLTASVGVGNAK
TTKETIEHICTLCSYLDIQAISTVRENKQDLQRFANKPETHVRWVKMRVQNHFADIISGL
MSETEALMRRIYSVDTISQINKNDFGTQKYEHWIIATQKKCRLLQLEDKEKESSICRHLF
ICTEHLRKFNDALIISEDARIEDALAYLTEFFTNVKNGPYTELEKKLTAKFQEKEPELTA
LSKDESNENPKLEELACILEEAYRYNPETHTLLFAKTRALVAALKKWIEANPLLSYIKPG
VLTGRGRRDQKTGMTLPMQKGVLDAFKTNKENRLLIATSVADEGIDISECNLVVLYEYFG
NVTKMIQVRGRGRAKDSKCILVTSKTEVVENEKHNRYKEEMMNEAIEKLQSWDETTFARK
IHDLQMKEKVLRDSRKKETRSKVVEGKKNLLCGKCKAYACSTDDIRVIKESHHTVLGDAF
KERYITKPHHKPVQFDCFEKKSKMYCQNTNCQHDWGIIVKYKTFDNLPVIKIKSFVLENV
ETGTQMDFQKWKNINFSLKNFDVEETFS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaagaggagcctgcagtgctacaggcggtacatcgagaagagcctg
aaccccgtctacatcctgggcaacatgacggactggctgtccgacgaggtgaaggagaga
gtccggaaggaggaggagaagggggtgacggcggccgccgcgctgttcctcgacgccatc
ctgcagctggaggcggagggctggctgcggggcttcctggacgccctggttgcagcaggg
tacactggactggcagaagcaattgaaaactgggacttcagcaaactggaaaaactagag
ttgcacagacagctgttgaagcggatagaagcaacaatgctagaagttgatccggtagca
ctcatgccgtacataaacatgtgcctgatagaaagggagtgtgaggagatcctgcaggtc
agcgaatacagaagcaaagcagctgggataactaaactcattgaatgtctctgtcgatcg
gataaggaaaactggccaaaaagtcttcagctagcactagataacacaggatattacaat
gcaagtgaactgtgggatataagagaagataatggcaaagatgtggatggtgaaatgaca
gatgcctgtgagaacagctttgaaaccgtggtgacgttttctgaagaagcagaatgtgat
aataatctcagtgaaaatctctgttcagcttcagaagggatctatcagtcttcacgtgtt
tatgaaccaaagaaggctcggagctaccagactgaacttgcgcagcctgctatcaatggg
aaaaacacattgatatgtgcccctacaggatctggaaaaacctttgtggcaattctgatt
tgtgaacaccatttccaaaacatgccctcaggacaaaaggcgaaagttgtctttcttgca
accaaagtgccagtgtacgaacaacagaaaactgtattcaagcagcattttgaaagaagt
ggatattctgttcaaggaattagtggtgaaacagttgcaaatgtctccgtagaaaaggtt
atacaggacagtgacatcattgtgctaacaccccagattcttgtgaatagcattgaggaa
gggatccttggctccctctccatcttcactctgatgatatttgatgagtgccacaacact
acgggcaatcacccttacaatgtgttaatgagtagatacctggaacaaaaatttgactct
gcaagccagctgcctcagattgtaggtttaactgcttctgttggagttggtaatgccaag
accaccaaggaaacaatagagcacatctgtaccctctgctcctaccttgacatacaggcc
atatccactgtcagagagaacaaacaggatctgcagagatttgcaaacaagccagaaaca
catgtcagatgggttaaaatgcgagttcagaatcactttgcagacattatctcaggtctg
atgtctgagacagaggcgttgatgaggaggatttactcagtggacactatctcccaaatc
aacaagaatgattttggaacacagaaatatgaacactggataattgccactcagaagaaa
tgcaggctgttgcaactggaagataaggagaaggagagcagcatttgtagacaccttttc
atttgcactgaacacctgcggaaattcaacgatgctcttatcatcagtgaagatgcccgc
attgaagatgctttagcctacctaactgaatttttcacaaatgtcaaaaatggaccatat
acagagttagagaagaaactgacagccaaatttcaagagaaagaaccagaactgactgcc
ctttcaaaagatgagtcaaatgagaatcctaagctggaagagcttgcttgcatcctggag
gaagcataccgctataacccagagactcacactcttctctttgctaagacgagagcctta
gtagctgctttgaaaaagtggatagaagcaaaccctctacttagctacataaagccaggt
gtgttgacgggtcgtggaagaagagatcaaaaaacaggtatgaccctcccaatgcagaag
ggtgtgctggatgcattcaaaaccaacaaagagaatagactgctaattgctacatccgtt
gctgatgaaggcattgatatttctgagtgcaaccttgttgtgctctatgaatacttcggt
aatgtcaccaaaatgatccaagtcagaggtcgtggaagggcaaaagacagcaagtgcatc
cttgtgacaagcaaaacagaagtggttgagaatgagaaacacaaccgttacaaggaagaa
atgatgaatgaagctattgaaaagctacagagttgggatgaaacaacatttgcaagaaag
atacatgacctgcaaatgaaggaaaaggtattacgagattccaggaagaaagaaacaaga
agtaaggtagtggaagggaaaaaaaatcttctgtgtggaaaatgcaaagcatatgcctgc
agtacagatgacatcagagttataaaggaatctcatcacactgtcctaggagacgcgttc
aaggagcgttatataacaaagcctcaccataaaccagtccagtttgattgttttgagaaa
aaaagcaagatgtactgccaaaatactaattgccagcatgactggggaatcatagtgaag
tacaagacatttgataatctaccagtgatcaaaatcaaaagctttgtattagagaacgtt
gaaactgggacacaaatggattttcagaaatggaagaatattaatttttctttgaagaat
tttgatgttgaagaaacattcagctga
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