Astur gentilis (Northern goshawk): 126038354
Help
Entry
126038354 CDS
T08649
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126038354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agen03041
]
126038354
Spliceosome [BR:
agen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126038354
Complex C
U5 SnRNP specific factors
126038354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
126038354
NCBI-ProteinID:
XP_049655967
LinkDB
All DBs
Position
5:complement(41355788..41417799)
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagtttgggaactacatcgggccggagctggactcggac
gatgacgacgatgagttgggcagagagtctaaagatctggacgagcttgaggatgatgac
gatgatgatgatatgggggaccacgacgaggaccaccctggcatggaggtggtgctgcat
gaggataagaaatactatcccactgctgaggaggtctatgggcctgaagtagagacgata
gtacaagaggaagacacacagcctctcactgagcctattattaaacctgtgaaaaccaaa
aaattctctctgatggaacagacattaccggtcactgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcatcac
ggcaagacttgttttgttgactgcctgatagaacagacacacccagaaatccggaagcgc
tacgaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtaggg
attaagagcacaccagtgactattgttctgccggacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcatgtcaatttttctgatgaggtgacagctggccttcgt
atttcggacggcgttgtgctattcattgatgcggctgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaagaaaggctagcagtgaccgtgtgcatcaacaagata
gaccgactgatcctggagctgaaattgccccctacagatgcttattacaaactcagacat
atcgtagacgaagttaatggtctgatcagcatgtattccaccgatgagaaccttgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagacatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccgaagacccgcaagttcactaaaaaggcc
ccaacgagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacgaccctgcccaggactctggatgaacttggc
atccacctaaccaaagaggaattgaaattgaacattcggccactcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgtgtgcagcatatcccctcc
ccgaaggtgggagccaagacaaaaatcgagcatacctacactggtggcgtcgactctgat
ctgggggaggccatgagtgaatgcgaccctgatggtccgctgatgtgtcacacaacaaaa
atgtacagcacggacgatggtgttcagttccacgcctttggcagagtgctcagtggtacc
atccatgctgggcagcctgtgaaggtccttggagaaaactataccctggaggatgaggag
gattcccagatctgcactgttggacgtctctggatctcagttgcaaggtatcacattgag
gtaaaccgggttcctgctggcaactgggtgctgatagaaggagtggaccagcccatagtg
aagactgcaaccgtcacggaacctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgttatcaaaatagctgtagagccagtgaacccctcggagctc
cccaaaatgttagatggtctccgcaaagtcaataagagttacccctcgcttactactaag
gtggaagagtctggggagcatgtgatcctggggacaggggagctctacctggactgtgtg
atgcatgatctacggaagatgtattcagagattgatatcaaggtcgctgatccagttgtg
acattctgcgagacagtggtggaaacatcctccctcaagtgctttgctgagacacccaac
aagaagaacaagatcacgatgattgctgagcctctggaaaagggacttgcagaggacatt
gaaaatgaagtggtccagataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttctatctgggcctttgggccagatgccact
ggcccaaacatcctagtagatgatacactgccctcagaggtggacaagtcgctgctgggc
tctgtgaaggacagcattgtacagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgcaacgtgaagtttaagatcctggatgcagtgattgctcaggagccc
ttgcaccggggtggaggacagatcatcccaacagcccggagagtggtgtattctgctttc
cttatggccacccctcgcttgatggagccctactactttgtggaggtgcaagctcctgct
gactgtgtgtctgcggtgtacacagtcctggccagacggagaggccatgtgacacaagat
gctccgatcccgggctctcctctctacaccatcaaagccttcatcccagccattgattca
tttggctttgagacagacttgaggacccacacgcagggacaagctttctcgctctctgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccgaccc
ctggagccccagccagccccacatctggccagagagttcatgatcaagaccaggcgtagg
aagggcttgagcgaagacgtgagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaagatgttgttctcaactaccccatgtga
DBGET
integrated database retrieval system
