Astur gentilis (Northern goshawk): 126049295
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Entry
126049295 CDS
T08649
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04115
p53 signaling pathway
agen04145
Phagosome
agen04148
Efferocytosis
agen04350
TGF-beta signaling pathway
agen04510
Focal adhesion
agen04512
ECM-receptor interaction
agen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126049295
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126049295
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126049295
04148 Efferocytosis
126049295
09143 Cell growth and death
04115 p53 signaling pathway
126049295
09144 Cellular community - eukaryotes
04510 Focal adhesion
126049295
09142 Cell motility
04820 Cytoskeleton in muscle cells
126049295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agen04131
]
126049295
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
agen00536
]
126049295
Membrane trafficking [BR:
agen04131
]
Endocytosis
Phagocytosis
Opsonins
126049295
Glycosaminoglycan binding proteins [BR:
agen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126049295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
126049295
NCBI-ProteinID:
XP_049681384
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All DBs
Position
22:13824278..13839598
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AA seq
1178 aa
AA seq
DB search
MGPTALLVLLLLLTLGVSEARRTAESRSDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGP
ESSSPAYRIEDASRIPAVPDSRFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDG
SGHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCE
KMENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGC
SSSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTT
LQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVS
CPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNR
CEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGK
PCEGEARENKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCV
GEARGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDEC
KEVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDATANKQVCKPRNPCTD
GTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYH
CKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDSIPDDRDNCPFIYNPQQYDYDRDDVGD
RCDNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNEMDNCQYVYNVDQRDTDLDGVGDQ
CDNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD
ACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDI
SETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTF
FINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGP
GEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIM
ADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggggccgacggctcttctcgtcctcctcctcctcctcacgctcggcgtctcggaggcc
aggcgcacggcagagtctaggagtgatgataacagcgtcttcgatctctttgaactcatc
ggcttcattcggaagggagctgggcgccgggcacccggggtgcacctggtgaagggacca
gaatcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgac
tccaggtttcaagacttactagatgccatccatgctgagaagggcttcatcctcctggcc
actctccggcaagccaagaagagtagaggcacgctgctgtccgtggaacagaaagatggc
tctggtcatgtcttcagtctagtatcaaatggcaaggcaggcaccctggacctgagcctt
tctggtgatggaaagcagcagttagtgtcagtagaggatgccttgctagctacaggacac
tggaagaatatcaccctgtttgtgcaggaggaccgggctcagctgtatgtggggtgtgag
aaaatggagaatgctgaactggacatccccatccagaacatcttcactagggacctggcc
agcagtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctg
cagaatgtgcggtttgtgtttggaaccactctggaaactatcctgaggaacaaaggctgc
tccagctccactagtgcgatcattactttggacaaccccatcaatggttccagcccagct
atccgcactaattatattggccataaaacaaaggacatccaagcagtctgtggtttttcc
tgtgatgagctaacaaatatgtttgtggaactgcaagggctccggtccatggttacaaca
cttcaagacagagttcgcaaagtgactgaagaaaatgaactcattgccaaagtggtccag
atcactcctggagtatgcattcataatggaatcttgcacaaaaataaagaggagtggact
attgacagctgcactgaatgtacctgccagaactctgccactatatgccggaaagtgtcc
tgtcctctcatgccttgttccaatgccactgtgcctgatggcgagtgctgcccccggtgc
tggcctagcgactatgcagatgatggatggtctccttggtctgaatggacttcatgttct
gtgacctgtgggaatggcattcagcagagagggcgatcctgtgacagtctcaataaccgc
tgcgaagggtcttctgtacagactcggacttgccaccttcaggagtgtgataagagattt
aaacaggatggtggctggagtcactggtcaccatggtcatcatgttctgtcacttgtggc
acgggcatcatcacaagaattcgtctctgcaactccccagtaccacagctgaatggcaaa
ccttgtgagggtgaggcaagagaaaacaaatcctgccagaaagatccttgcccaattaat
ggcaactggggaccgtggtctccatgggatgcttgcacagtgacatgtggaggaggactt
caaaaacgtagtcgtctctgcaataatcctgagcctcagtatggtgggaagacttgcgta
ggtgaagctagagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctg
tctaatccctgctttgcggggactacatgtaccagctcccctgatggttcctggaagtgt
ggtgcctgtcctgctggctaccatggtgatggcgtccactgccaagacattgatgagtgc
aaagaggttcctgatgcttgctttgtcttcaatggagtgcacaggtgtgagaatactgaa
cctgggtacaactgtctgccttgtccaccacgtttcactgggacacagccatttggtcgc
agtgttgaggatgccacggctaacaaacaggtctgcaagccacgtaatccatgcacagat
ggaacacatgactgcaacaagaatgccaaatgcaattaccttggccacttcagtgacccc
atgtatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagat
actgacttggatgggtggccaaatgagaaccttgtttgtgttgccaatgccacttaccac
tgtaaaaaggataactgccctaatctgcccaactcagggcaggaagactatgataaggat
gggattggtgatgcctgtgacaacgatgatgatgatgacagtattcctgatgaccgggac
aactgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgac
cgctgtgataactgcccttacaatcacaaccctgatcaaactgacactgacaacaatgga
gaaggagatgcatgtgcagtggatattgatggagatggggtccttaatgaaatggacaac
tgccaatatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcag
tgtgataactgtccactggaacacaaccctgaccaggaagacactgattctgaccgcata
ggtgatcagtgtgacaacaaccaggacatagatgaagatggccatcaaaataatcttgat
aactgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgat
gcctgtgaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagattg
gttgccaaccctgaccaagctgattctgatggtgatggacgtggagatgcttgcaaagat
gactttgaccaagacagtgtgccagacattgacgatatctgccctgaaaatgtggacatt
agtgagactgatttccgaagatttcagatgattcccctggatcccaaaggaacatcccaa
aatgatccaaactgggttgttcgtcatcagggtaaagaactggttcagacagtcaactgt
gatcctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggcaccttc
ttcatcaatacagaaagggatgatgattatgcaggctttgtatttggctaccaatctagc
agtcgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacacca
accaaagctcaaggctactcgggtctctccatcaaagttgtgaattccaccactggtccg
ggagaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaact
ttgtggcatgaccctcgtcacataggctggaaagatttcactgcatacagatggcgcctc
agccatagaccaaagactggttacatcagggttgtaatgtatgaagggaagaaaatcatg
gcagactcaggaccgatctatgacaaaacctatgctggtggtcggctaggattatttgtc
ttctctcaagaaatggtgttcttctctgatcttaaatatgaatgcagagatccgtaa
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