KEGG   Agromyces protaetiae: ET445_11165
Entry
ET445_11165       CDS       T05835                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
agf  Agromyces protaetiae
Pathway
agf03030  DNA replication
agf03410  Base excision repair
agf03420  Nucleotide excision repair
agf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:agf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ET445_11165 (ligA)
   03410 Base excision repair
    ET445_11165 (ligA)
   03420 Nucleotide excision repair
    ET445_11165 (ligA)
   03430 Mismatch repair
    ET445_11165 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agf03032]
    ET445_11165 (ligA)
   03400 DNA repair and recombination proteins [BR:agf03400]
    ET445_11165 (ligA)
Enzymes [BR:agf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     ET445_11165 (ligA)
DNA replication proteins [BR:agf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ET445_11165 (ligA)
DNA repair and recombination proteins [BR:agf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     ET445_11165 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ET445_11165 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     ET445_11165 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ET445_11165 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT HHH_5 HHH Nlig-Ia PTCB-BRCT
Other DBs
NCBI-ProteinID: QAY73822
UniProt: A0A4P6FCN5
LinkDB
Position
2409121..2411481
AA seq 786 aa
MSDIRDLPTDFDAAHRESETLRERIEQARLAYYGDGDSTLSDAEYDADFHRLQALEAAFP
ELVGQDSPTQQVGAAIVSAGFPEHEHAERMLSLDNVFSIDEFREWATKTAAAAGRPVRWL
SELKIDGLAISLAYRDGVLETATTRGDGRVGEDITENVDFIPVIPRTLSGEGFPPFFEVR
GEIFLKTVDFEALNDRQHALQAAYETEELAKGRAADAIKTKYPEFANARNTAAGSLRQRR
ENKSDAELALMRERLGRLSLYLHGIGAWAGVDETGPEVRNQSEIYGLLAGWGLPVSPHSR
VFETVDEVADYIVERGEHRHSVEHEIDGIVVKVDELGLHDELGATSRAPRWAIAYKYPPE
EVHTKLLDIVVGVGRTGRATPYAVMEPVKVAGSTVRQATLHNQQVVKAKGVLIGDTVVLR
KAGDVIPEILGAVEQLRDGSEIEWHMPEFCPECGTTLRAMKEGDVDLRCPNARSCPAQVR
GRVEHIGSRGGLDIEALGEVTAAALTQPLIPVIPPLATEARLFDLELDELVPIEVVVRDA
ETGELKLDEATGAPVRRAPFQKFGPKSYPPGTEDLDPAERRRRGIRKDYQEVLPSGAATT
LLAELEKAKTKPLWRLLVSLNIRHVGPVAARALADWFGSLDAIRAASRDELAEVDGVGGI
IADSLLDWFDVDWHREIVERWTAAGVQWAIPGHPGPGAAAEAGGVLAGLTVVATGSLEGY
SREGAQEAIIAAGGKAASSVSKKTDFVAAGPGAGSKLTKAEELGIRVLDAAQFKLLVTEG
PAALDA
NT seq 2361 nt   +upstreamnt  +downstreamnt
gtgagcgacatccgcgacctcccgaccgacttcgacgcagcccaccgcgagtccgagacg
ctgcgcgagcgcatcgagcaggcgcggctcgcgtactacggcgatggtgactcgacgctc
tccgacgcagagtacgacgccgacttccaccggctccaagcgctcgaagcggcgttcccc
gagctcgtcgggcaagacagcccgacccagcaggtcggtgccgcgatcgtgtcggcgggg
ttccccgagcacgagcatgccgagcgcatgctgagcctcgacaacgtcttctcgatcgac
gagttccgcgagtgggcgacgaagaccgccgcggcggcgggcaggcccgtgcgctggctc
tccgagctcaagatcgacgggctcgcgatcagcctcgcctaccgcgacggcgtgctcgag
acggcgaccacgcgcggcgacgggcgcgtcggcgaagacatcaccgagaacgtcgacttc
atcccagtcatcccgcgcaccctgtcgggcgaggggttcccgccgttcttcgaggtgcgc
ggcgagatcttcctgaagaccgtcgacttcgaggcgctcaacgaccgccagcacgcgctg
caggcggcctacgagaccgaagaactcgccaagggccgagcggccgacgcgatcaagacg
aagtaccccgagttcgcgaacgcgcgcaacacggcagccggcagcctgcggcagcgacgc
gagaacaagtccgacgccgaactcgccctcatgcgcgaacggctcgggaggctctcgctc
tacctccacggcatcggcgcgtgggccggtgtcgacgagaccgggcccgaggtgcgcaac
cagtccgagatctacggcttgctcgccgggtgggggttgcccgtctcaccgcactcgcgc
gtgttcgagacggtcgacgaggtcgccgactacatcgtcgagcgcggcgagcaccgccac
tcggtcgagcacgagatcgacggcatcgtcgtcaaggtcgacgaactcggactgcacgac
gagctcggtgccacgagccgagcaccgcgctgggcgatcgcctacaagtacccgcccgaa
gaggtgcacacgaagctcctcgacatcgtcgtcggcgtgggtcgcaccggccgggccacg
ccctacgccgtcatggagcccgtcaaggtcgcaggctcgaccgtgcggcaggcgacgctc
cacaaccagcaggtcgtgaaggcgaagggcgtgctcatcggcgacaccgtcgtgctccgc
aaagcgggcgatgtcatccccgagatcctcggcgccgtcgagcagctgcgcgacggcagc
gagatcgagtggcacatgcccgagttctgccccgagtgcggcaccacgctccgagcgatg
aaagagggcgacgtcgacctccgttgccccaacgcgaggtcgtgcccggcccaggtgcgc
gggcgcgtcgagcacatcgggtcgcgcggcggcctcgacatcgaagccctcggcgaagtc
acggccgcggcgctcacgcagccgctcatccccgtgatcccgccgctcgcgaccgaggcg
cggctgttcgacctcgaactcgacgagctcgtccccatcgaggtcgtcgtgcgcgacgcc
gagacgggcgagttgaaactcgacgaagcgacgggtgcgcccgtacggcgagcgccgttc
cagaagttcgggccgaagtcgtacccgccgggcaccgaagacctcgacccggcggagcgt
cgtcgccgcggcatccggaaggactaccaagaggtcctgccctcgggcgccgccacgacc
cttctcgccgaactcgagaaggcgaagaccaagccgctgtggcgactcctcgtctcgctc
aacatccggcatgtcggcccggtcgcggcgcgcgcgctcgccgactggttcgggtcgctc
gacgcgatccgtgccgcgagccgcgacgaactcgccgaggtcgacggagtcggcgggatc
atcgccgactccctcctcgactggttcgacgtcgactggcaccgcgagatcgtcgagcgg
tggacggctgccggcgtgcaatgggcgatcccggggcatccggggcccggcgcggccgcc
gaagccgggggagtgctcgcggggctcacggtcgtcgcgaccggctcgctcgaaggatat
tcgcgcgaaggcgcgcaggaggcgatcatcgcagcgggcggcaaggccgcgtcgagcgtg
tcgaagaagaccgacttcgtcgccgcggggcccggcgccgggtcgaagctcacgaaggcc
gaagagctcggcatcagagtgctggatgccgcgcagttcaagctgctcgtgaccgagggg
ccggcagcgctcgacgcgtag

DBGET integrated database retrieval system