Agrococcus sp. SGAir0287: C1N71_05740 Help Entry C1N71_05740       CDS       T05973                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism agg  Agrococcus sp. SGAir0287 Pathway agg03030   DNA replication agg03410   Base excision repair agg03420   Nucleotide excision repair agg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:agg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C1N71_05740    03410 Base excision repair     C1N71_05740    03420 Nucleotide excision repair     C1N71_05740    03430 Mismatch repair     C1N71_05740  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:agg03032]     C1N71_05740    03400 DNA repair and recombination proteins [BR:agg03400]     C1N71_05740 Enzymes [BR:agg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C1N71_05740 DNA replication proteins [BR:agg03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C1N71_05740 DNA repair and recombination proteins [BR:agg03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C1N71_05740    NER (nucleotide excision repair)     GGR (global genome repair) factors      C1N71_05740    MMR (mismatch excision repair)     DNA ligase      C1N71_05740   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C1N71_05740 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 DNA_ligase_ZBD HHH_5 BRCT HHH Nlig-Ia PTCB-BRCT RNA_lig_T4_1 zf-IS66 Zn_ribbon_TFIIB Motif Other DBs NCBI-ProteinID:  QCR19004 LinkDB All DBs Position 1217971..1220349 Genome browser AA seq 792 aa AA seqDB search MTTTLDAANDHAQQLREQIERARDAYYQQDAQVLSDAEYDALVHELEALEAEHPELQSQD SPTQTVGGAVSALFDPVTHAERMLSLDNVFSVDELREWAAKTEAAAGRTGAWLCELKIDG LAIALRYERGRLVTAATRGDGRVGEDVTENALRVAGIPRELTGTGHPDLVEVRGEVFIPS AEFEALNALQERLRERQLAATRERWEARPAATRGEFDEQRAVDSALRRFPAFANPRNAAS GGLRQQLDKKEGLDREAADARVEALRLYVHGIGAWQDPPVASQSEVYGLLAEWGLPTSPY LRVVDDVDGVVDFVEQYGRERHSVEHEIDGVVVKVDELALHDELGATSRAPRWAIAYKYP PEEVHTRLIDIVVSVGRTGRATPFAVMEPVRVSGSVVRQATLHNQDVVVAKGVLIGDTVV LRKAGDVIPEVLGPVAELRDGSERAFVMPTHCPDCGTELRPMKEGDVDLRCPNARSCPAQ VRGRVEHVGSRGALDVEALGEVTAAALTQPEVPSTPPLETEAGLFDLTIDDLIGIEVVVR DGETGEPKRDPKTDEIVRRTPFQRNPTAAERKEGLSGPQPSKQALTLLAELERAKTTDLW RQLVSLSIRHVGPVAARALAGWFGSLEAIERATRDELAEVEGVGPIIADAVIEWLAVDWH REILERWRAAGVRFAIPGHPGPGAAAAAGGVLAGLTVVATGSLEGYTREGAQEAIMAAGG KAASSVSKKTDYVAAGPGAGSKLTKAETLGVRIIDAAQFHLLVTEGPAAIAEPADADADV DADTTESATEEA NT seq 2379 nt NT seq  +upstreamnt  +downstreamnt atgacgacgacgctcgacgcggcgaacgaccacgcacagcagctccgcgagcagatcgag cgggcgcgcgacgcgtactaccagcaggacgcgcaggtgctctccgacgccgagtacgac gcgctcgtccacgagctcgaggcactcgaggccgagcatcccgagctgcagagccaggac tcgccgacgcagaccgtcggcggcgccgtctcggcgctcttcgatcccgtcacccacgcc gagcgcatgctgagcctcgacaacgtcttctccgtcgacgagctgcgcgagtgggccgcg aagaccgaggccgccgcggggcgcacgggcgcgtggctgtgcgagctgaagatcgacggc ctcgcgatcgcgctgcgctacgagcgcggacgcctcgtgacggcggccacgcgcggcgac ggacgcgtgggggaggacgtcaccgagaacgcgctgcgcgtcgccggcatcccgcgcgag ctgaccggcacggggcaccccgacctcgtcgaggtgcgcggcgaggtcttcatcccgtcc gccgagttcgaggcgctcaacgcgctgcaggagcggctgcgcgagcggcagctcgcggcg acgcgcgagcgctgggaggcgcgccccgccgcgacccgcggcgagttcgacgagcagcgg gccgtcgactcggcgctgcgccgcttccccgccttcgcgaacccgcgcaacgcggcgtcg ggcggcctccgtcagcagctcgacaagaaggaggggctcgatcgcgaggcggccgacgcg cgcgtcgaggcgctccgcctctacgtccacggcatcggcgcctggcaggatccccccgtc gcatcgcagtcggaggtctacggcctgctcgccgagtgggggctgccgacgagcccgtac ctgcgcgtcgtcgacgacgtcgacggcgtcgtcgacttcgtcgagcagtacggccgcgag cggcactcggtcgagcacgagatcgacggcgtcgtcgtgaaggtcgacgagctcgcgctg cacgacgagctcggcgccacgagccgcgccccgcggtgggccatcgcctacaagtacccg cccgaggaggtgcacacgcgcctcatcgacatcgtcgtgagcgtcggccgcacgggccgg gccacgccgttcgccgtcatggagcccgtgcgcgtctcgggatccgtcgtgcggcaggcg acgctccacaatcaggacgtcgtggtcgcgaagggcgtgctcatcggcgacaccgtcgtg ctgcgcaaggcgggcgacgtcatccccgaggtgctcggccccgtggcggagctgcgcgac ggctccgagcgcgcgttcgtcatgccgacgcactgccccgactgcggcaccgagctgcgg ccgatgaaggagggcgacgtcgacctgcggtgtcccaacgcccgctcgtgccccgcccag gtgcgcggacgcgtggagcacgtcggcagccgcggtgcgctcgacgtcgaggcgctcggc gaggtgacggccgcggcgctcacgcagccggaggtgccgtcgacgccgccgctcgagacc gaggcgggcctcttcgacctcacgatcgacgacctcatcggcatcgaggtcgtcgtgcgc gacggcgagacgggcgagcccaagcgcgatcccaagaccgacgagatcgtgcgccgtacg cccttccagcggaacccgaccgccgcggagcgcaaggaggggctctccggtccgcagccg tcgaagcaggcgctcacgctgctcgcggagctcgagcgcgcgaagaccaccgacctgtgg cgccagctcgtcagcctcagcatccggcacgtcggaccggtcgcggcacgggcgctcgcc ggctggttcgggtcgctcgaggcgatcgagcgcgcgacacgcgacgagctcgcggaggtc gagggcgtcggccccatcatcgccgacgccgtgatcgagtggctcgccgtcgactggcac cgggagatcctcgagcggtggcgggcagcgggcgtgcggttcgcgatccccggtcatccc ggtccgggtgccgccgccgcggcgggcggcgtcctcgccggcctcacggtcgtcgcgacc ggatccctcgagggctacacgcgcgagggcgcgcaggaggcgatcatggcggcgggcggc aaggctgcctcgagcgtctcgaagaagaccgactacgtcgccgccggccccggcgcgggc tcgaagctcacgaaggcggagacgctcggcgtgcgcatcatcgacgccgcgcagttccac ctgctcgtcaccgagggtccggcggcgatcgccgagcccgccgacgccgacgccgacgtc gacgccgacaccaccgagtccgccaccgaggaggcctga

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