Aggregatibacter sp. oral taxon 513: J5A60_07120
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Entry
J5A60_07120 CDS
T08731
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agj03009
]
J5A60_07120 (rlmC)
Enzymes [BR:
agj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
J5A60_07120 (rlmC)
Ribosome biogenesis [BR:
agj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J5A60_07120 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
UPF0020
Methyltransf_12
Methyltransf_25
Methyltransf_32
Methyltransf_15
Cons_hypoth95
GFO_IDH_MocA
PALP
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QUC05502
LinkDB
All DBs
Position
complement(1485503..1486678)
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AA seq
391 aa
AA seq
DB search
MIQCEHYQRGDCRSCQWLELPYSVQLEQKTVHLQQQLHGLDTSHLSWIAPFQSSLDGFRN
KAKMVVSGAVERPILGILPDPREPQSAVDLCDCPLYPQRFQAIFPLLKDFIARAGLVPYN
VAKQKGELKHLLLTESQHSRQLMLRFVLRSETKLPLIQRELAGLRQKLPQLAVISVNIQP
QNAAILEGEKEIFLTEQHTLPETFNGIPLFIRPQGFFQTNPQVAEGLYGTAQQWIKDLPV
RQLWDLFCGVGGFGLHCLKALQMQNSKQQIHLTGIEISASAIAAAKLSAQQLGLEKQVHF
QSLDAANFALAQADKPDLVIVNPPRRGIGQSLAEFLNKMRPHFILYSSCNAETMGKDLRS
LTHYQLEKIQLFDMFPHTAHYEVLVLLKWIG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgattcagtgcgaacattatcaacgaggcgattgtcgttcttgtcaatggttggaactg
ccgtattctgttcaactagaacagaaaaccgttcacttgcaacagcagctgcacggttta
gatacgtctcatttgagttggattgcgccttttcaatcttcccttgatgggtttcgtaat
aaagccaaaatggtggtgagtggcgctgtcgaacgccccattttggggattctaccggat
ccgcgagagccacaaagtgcggtggatttatgcgattgcccactttacccacaacgtttt
caagctatctttcctcttcttaaagatttcattgcacgcgcaggccttgtgccgtataac
gtggcaaagcaaaaaggcgaattgaaacatcttttattgacagaaagccaacacagccgg
caactcatgttgcgctttgtattgcgttcggaaaccaaattgccgttgattcaacgagaa
ttggcgggattgcgtcaaaaattaccacaacttgccgtcattagcgtcaatatccaaccg
caaaatgccgcgattttagaaggtgaaaaagagatttttctgacggagcaacatacgttg
cctgagacctttaacggcattccactttttattcgcccgcagggattttttcaaaccaat
ccgcaggttgctgaaggattatacggtacggcacaacaatggataaaagatctgccagtt
cgtcaactttgggatttgttctgtggtgtgggcggtttcgggctgcattgcttgaaagcg
ttgcaaatgcagaactcgaaacaacaaattcacctcactggcattgaaatttccgcttct
gccattgccgccgcgaaactatcggcacaacaactcggattggagaagcaagttcatttt
caatccttggatgcggcaaattttgccttggctcaagcagacaaacccgatttggttatc
gtcaacccacctcgtcgaggcataggtcaatcgcttgctgaatttctcaataaaatgcga
ccgcactttattttgtattccagttgcaacgctgaaaccatggggaaagacttgcgctcg
ctcacccattatcaactggaaaagatccaactgttcgatatgttcccacataccgcacat
tatgaggtgttggtgttgttgaaatggattgggtaa
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