Akkermansia glycaniphila: PYTT_2005
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Entry
PYTT_2005 CDS
T04551
Name
(GenBank) rnd mfp: efflux transporter rnd family mfp subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
agl
Akkermansia glycaniphila
Pathway
agl01501
beta-Lactam resistance
agl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PYTT_2005
01503 Cationic antimicrobial peptide (CAMP) resistance
PYTT_2005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agl03036
]
PYTT_2005
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agl02000
]
PYTT_2005
01504 Antimicrobial resistance genes [BR:
agl01504
]
PYTT_2005
Chromosome and associated proteins [BR:
agl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PYTT_2005
Transporters [BR:
agl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PYTT_2005
Antimicrobial resistance genes [BR:
agl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PYTT_2005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
BORCS7
She9_MDM33
Motif
Other DBs
NCBI-ProteinID:
SEH95007
UniProt:
A0A1H6M1G1
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All DBs
Position
I:2357387..2358763
Genome browser
AA seq
458 aa
AA seq
DB search
MTTHRLFSLIALGMTVAVSGSLLSSCKDQASAKQHGEMPAAPVQVTPIIHENVNVSEEWY
GYLRGVEDAAVKPQVTGVLVEKSYKDGSLVEKGAPLFEIDKSLFQATLDQAKATLAQAKA
AKAQALAAQGKNKQDVERYAKLVASGSVSEKNLTDAQQALKESEAQVLQAEAQIQMAEAQ
IETARINLEYATIKAPISGIAGVAAPSVGDLLSPANQNPLVTVSSINPIRVDFAVSDKTV
LETLGKFKKGERNLDLIPKFQLILPDGRTYGEDGHVVALDRAVDMGTGQISVVGQVPNPD
FVLRPGMSVRVRAVTETIENAALVPERAIVSVQSANFVIVLGKDNVPSMVPVKLGPVTDV
KVKEENGKERVQPMQVITLLLPPDKMLPAGTQVVVQGSTAAMQAAGMHKPVRPEPFVYSP
PQPTIESKSSKVSETADGAAKDAAMHAPAAGEKSAPSK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcatcgcttattttcccttattgccctcggtatgacggttgccgtttccggt
tctctgctgtcttcctgcaaggatcaggcttccgccaagcagcacggcgagatgccggcc
gccccggtgcaggtaactccgatcattcacgagaacgtcaatgtgtccgaggaatggtac
gggtatctccgtggtgtggaagatgccgccgtgaagccgcaggtgacgggggtgctggtg
gagaagagctataaggacggttccctcgtggagaagggtgcgcctttgttcgagatcgac
aagtctcttttccaggcgactctcgatcaagccaaggcaacgctggctcaggccaaggcc
gccaaagcgcaggctctggccgcccaaggcaagaacaagcaggatgtggaacgttacgcc
aagctggttgcgagcggttccgtgtccgagaagaatttgacggacgcccagcaggcgttg
aaggagagcgaagcgcaggtattgcaggccgaagcccagatccagatggcagaagcccag
atcgaaaccgcccgcatcaatctcgagtatgcgacgatcaaggctccgatttccgggatt
gccggtgtggcggctccttccgtgggggatttgctgtctcctgccaatcaaaatcctttg
gtgacggtgtcgtcgatcaatccgatccgtgtcgatttcgccgtgagtgacaagacggtg
cttgagacgctgggcaagttcaagaagggtgagcgcaatctggatctgattcccaaattc
cagctgattcttcccgacggcaggacgtacggagaggatggacatgtggtggctctcgac
cgcgcagtcgatatgggcacggggcagatcagcgtggtcggccaggtgccgaatcccgat
ttcgtactgcgtcccggcatgtccgtgcgcgtacgtgccgtgacggagacgatcgaaaat
gcagcccttgtgcctgagcgcgccattgtgagcgtgcaaagcgccaatttcgtgatcgta
ctcgggaaggataacgtaccttcgatggttccggtcaaacttggtcccgtgacggatgtg
aaagtgaaggaagaaaacggcaaggaacgcgtgcagccgatgcaggtgattacgctcctt
ctgcctccggacaagatgcttcccgccggtactcaggttgtcgtgcagggatcgacggcg
gccatgcaggctgccggaatgcataagcccgtccggcctgaaccgttcgtgtattcacca
cctcagccgacgatcgagtcgaagagttcgaaggtgtcggaaacggccgacggagccgcc
aaggatgctgcgatgcatgctccggctgccggtgagaaatcagctccttccaaataa
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