Alnus glutinosa (common alder): 133857922
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Entry
133857922 CDS
T10577
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133857922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aglu03000
]
133857922
Transcription factors [BR:
aglu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133857922
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Motif
Pfam:
HLH
bHLH_SAC51
ERK-JNK_inhib
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
133857922
NCBI-ProteinID:
XP_062149294
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Position
14:complement(22366932..22372794)
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AA seq
557 aa
AA seq
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MYHCVPDFEMDDNYSIPSSNGVGRPRKSSLPEDEIMELLWQNGQVVMHSQNHRSTRRSPP
SKYDDAMIPGEQSTAREIRSEQELAAHNQHNQNSQPFMQEDEMASWLHYPLVDDDPALDH
TFCADLLYPGNNLGNNSNSTNPTVRTNSDTEVHPAVTSEVGIALPPIPPARRTELAESKV
QNFVHFSRHKAKVAGGERLDQNAPSSSRSPAVVRESTVVDSSDTPAVWHALDAGDRGCAT
KNGDASAGTSSAGGGGVSGMKEMSTCDVTVSSSPGCSSASASAEPALKPHAEDRKRKGRE
ANDTECQSEDVEFEYVDTKKQARGSTTTKRSRAAEVHNLSERRRRDRINEKMKALQELIP
RCNKSDKASMLDEAIEYLKSLQLQVQASCLFQKFYGQNQSHIPMMSMGCGMVPMMFPGVQ
QYMPAMGMGIGMGMGMEMGINRPMMPFPNLLAGSSLPTPSAAAHLGPRFPLPAFHMLPVP
APDPSRMQAANQSEQMLNSLGAQLPSQSRFPNFVNPYQQYVATQQMQVPPQQNEALAQPS
SSKPRANKGPENLDNRQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtatcactgcgtgccggatttcgaaatggacgacaattactcgatcccctcatcaaat
ggcgttggtcgccccagaaaatcgtctttgcctgaggacgagatcatggagctgctatgg
cagaacggtcaggtggtgatgcacagccagaaccataggtcaacgagaagatctccgccg
tccaagtacgacgacgccatgatcccaggggagcaatcgacggccagggagatccgatcg
gaacaagaactggccgctcacaaccagcacaaccagaactcccagccgttcatgcaagaa
gacgaaatggcttcgtggcttcactaccctctcgtggacgacgaccctgccttggaccac
actttctgcgccgaccttctctacccgggtaacaatctcggcaataatagcaacagtact
aaccctacagtccgtacgaacagcgatacggaggtccatccggccgtgacgtcggaggtg
gggatcgctctgccgccgataccgccggcaaggaggacggagctggcggagtcgaaggtg
cagaacttcgtgcacttctcgaggcacaaggcgaaggttgctggaggagaacgactcgat
caaaacgcgccgtcgagctcgagaagcccggcggtagtgagggaatcgacggtggtggac
tccagcgatacgccggcggtgtggcacgcgttggacgccggcgatcgaggctgcgcgacc
aagaacggcgatgcatcggcgggcacatcgtccgccggaggtggcggtgttagtggtatg
aaggagatgtcgacgtgtgatgtgaccgtgtcgtcatcacccggctgctccagcgccagc
gccagcgccgagccggctctgaagccgcatgctgaggatcgcaagcgtaaaggacgagaa
gccaacgacaccgagtgccaaagcgaggatgttgagtttgaatatgtggatacaaagaaa
caggctcgtggatcaacgactacaaagagatcccgagctgcagaggtccacaatctttcg
gagaggagacgtcgagataggataaatgagaagatgaaagctttgcaagaactcatacct
cgttgcaacaagtcagacaaagcttcaatgttagatgaggcaattgagtacttgaagtct
cttcaattgcaagtacaggcgtcatgcttattccagaagttttatggacagaaccagagt
catattcctatgatgtccatgggatgtggcatggtccccatgatgtttcctggtgtccag
cagtatatgccagcaatggggatgggtattgggatgggtatgggcatggaaatgggcatc
aatcggcctatgatgccatttcccaatctgttagctggttcatcattgccaaccccatct
gcagcagctcatctgggaccacgatttccattgcctgcttttcatatgttaccagttcct
gcacctgatccttccagaatgcaagcagccaaccagtcagagcagatgctaaactcacta
ggcgcacagctaccaagccagtcacggttcccaaattttgtcaatccttatcagcaatat
gttgctacccagcagatgcaggtaccaccacagcagaatgaagcactagcccagccaagt
agtagcaagccaagagccaataagggacctgaaaatctcgacaatcgccaatga
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