Alnus glutinosa (common alder): 133858146
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Entry
133858146 CDS
T10577
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133858146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133858146
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133858146
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
AAA_28
nSTAND3
AAA_23
AAA_5
AAA_15
AAA
NACHT
SMC_N
AAA_18
AAA_25
PduV-EutP
Zeta_toxin
AAA_22
SRP54
AAA_33
AAA_30
AAA_24
Arf
Motif
Other DBs
NCBI-GeneID:
133858146
NCBI-ProteinID:
XP_062149583
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Position
14:complement(23898494..23902678)
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AA seq
300 aa
AA seq
DB search
MVNNEASKPRGEEEENESSNAIRVCGMQFAYEGEPPLFADFNLELLPGSRCLLVGANGSG
KTTLLKILAGKNMVGGRDVVRVLNQSAFHDTQLVCGGDLAYLGGSWSKTVGSAGEIPLQG
DFSAEHMIFGVEGIDPVRRESLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLL
DEVTVDLDVVARLDLLDFFKEECDQRGATVVYATHIFDGLETWATHLAYIQDGELRRADK
LSEVNELKNSANLLSVVEAWLRAETKREKKKPINPPAQIQKTSPFGASPFKSSRHMAYYR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacaatgaagcttcgaagccgagaggagaagaagaagaaaatgagagttcaaac
gctatcagagtctgcggcatgcaattcgcgtacgagggagagccaccgctctttgccgac
ttcaacctcgagctcctacccggatctcgatgccttctcgttggtgccaacggatctggg
aagaccactttgctgaagattcttgcgggtaaaaatatggtaggaggaagagatgtggtg
cgcgtgctgaatcaatcggcttttcatgacacccagttggtgtgtggtggcgacttagcc
tatttgggaggatcttggagtaaaacagttggctccgctggtgagattccacttcagggt
gatttttctgccgaacatatgatatttggagttgaagggattgaccctgttaggagagag
agtttgattgagctacttgatattgatctgcaatggcgaatgcataaggtatctgatggg
cagaggcgtcgagtccaaatctgcatgggtcttcttcatcctttcaaggtccttttgcta
gatgaggttactgttgacctggatgttgttgctagactggacttacttgacttctttaag
gaagaatgcgatcagagaggagccacagtagtatatgcaacacacatttttgatggtcta
gagacatgggcaacacatttggcatacatccaagatggggagttgaggagggcagataag
ttatcagaggttaatgaattgaagaattcagccaatctgctttccgtggttgaggcctgg
ctccgtgctgaaaccaagcgtgagaagaagaaacccattaaccctcctgcccaaatccag
aagacatctccttttggtgcttctccttttaagtcatccagacacatggcatactaccgt
tag
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integrated database retrieval system
