Entry
Name
(RefSeq) switch 2 isoform X1
KO
K20098 DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:aglu00001 ]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:aglu03400 ]
133860910
DNA repair and recombination proteins [BR:aglu03400 ]
Eukaryotic type
Other factors with a suspected DNA repair function
Helicases
133860910
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
2:9032638..9044005
Genome browser
AA seq
891 aa AA seq DB search
MSLHLFKETLRPCTKNPLPSLSSASITHSFDPIIPRKPPKSSLSQQLLRLQDPDSLPPIQ
PRRSTKQPQGHSGDGRNEEAEKEEEEEKQKAPGPKGFGRTTKLGQFQFDHTGPFEPLVLS
SQNDIPLVQVPASINCRLLEHQREGVKFLYNLYKNNHGGILGDDMGLGKTIQTIAFLAAV
YGKDGEGVHSTILKENQVGKKDPVLIICPTSVINNWESEFSKWATFSVSVCHGANRDLIY
EKLEVCAVEILIASFDTYRIHGGILSKVKWEIVVVDEAHRLKNEKSKLYGACSEIKTQKR
FGLTGTVMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPERFLRVADER
KQHLVAVLRKYMLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYSRMLQLPEVQCLVNK
DLPCSCGSPLTQVECCKRTVPNGIIWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLE
LIKPNPKDDPDKRRKDAEFASAVFGPDIDLAGGNTQSESFMGLSDVKHCGKMRALEKLMF
SWLSEGDKVLLFSYSVRMLDILEKFLIRRGYCFSRLDGSTPSNLRQSLVDDFNSSPSKQV
FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLE
ELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEII
ELHEKQGLEDGHHLITKQGLTELGNNFDSSKEVGVIFSSESETRVPGDSKWAKTSKPAFE
DMGIVYAHRNEDVVNVGAGIQGKMDLSSNPQNDRLNQPCIPMARRSKAECGSERENISSI
KDKKRRQYSLLAQFVGVGELEFSKWLLSATPLEREKVLRDFKKRKEKVPNG
NT seq
2676 nt NT seq +upstream nt +downstream nt
atgtcactgcacctcttcaaagaaaccctcaggccctgcacaaaaaacccgttaccatcg
ctgtcctccgcatccataacccacagctttgaccccataatccctagaaaaccccccaag
tcgtctctctcacagcagcttctgcgcctccaagacccagactctctgcccccaattcaa
ccccggcgttcaactaagcaacctcaaggccatagtggtgatggaagaaatgaagaagca
gagaaagaagaagaagaagagaaacagaaagcgccaggaccaaaagggtttgggagaacc
accaaattgggtcaatttcagtttgatcatacaggaccatttgagccattggttttgtcc
tcacagaatgacattccactagtacaggttcccgcatctatcaactgtaggttgcttgaa
catcaaagggagggagtgaagtttttatataatttatacaagaacaaccatgggggcatc
cttggagatgacatgggacttggcaagaccattcaaacaattgccttcctggctgctgtg
tatggtaaagatggagaaggtgttcattctaccatactgaaggaaaatcaggttggaaaa
aaggacccagtactaataatttgcccgacttctgttatcaacaattgggagagtgaattc
tctaagtgggcgacctttagtgtttctgtttgccatggtgctaaccgcgatctgatatat
gagaaattagaagtatgtgcagttgagatacttattgccagttttgacacatacagaatt
catggtggaatattgtctaaggttaaatgggagattgtagttgttgatgaggcgcaccgg
cttaagaatgagaagtcaaagctctatggagcatgttcagaaattaaaactcaaaaacgt
tttggtctgacaggaaccgtaatgcagaataaaataatggaattgtttaatctctttgac
tgggttgcaccagggtccttgggaacacgggaacatttccgggagttttatgatgaaccc
ctcaagcatggtcagaggtcaactgctcctgaaagatttttacgggttgctgatgagcga
aaacagcatctagtggcagttcttcgtaaatatatgttaagaaggacaaaggaggagact
attgggcatcttatgatggggaaggaggataatgtcgtgttctgtgccatgagtgaattg
cagaaacgggtgtacagtagaatgttacaactaccagaagtccaatgccttgtaaataag
gaccttccatgtagctgtggaagccctcttactcaagtcgaatgttgcaaaaggactgta
ccaaatggaatcatttggccttaccttcacagggacaacccagatggttgtgattcgtgc
cccttttgccttgtccttccttgccttgtcaagttgcaacagataagcaatcacctggaa
ttgattaagcctaaccccaaggatgacccagataaacgaaggaaagatgcagagtttgcc
tcggctgtctttggccctgatattgatttggcaggagggaatacccaaagtgagagtttc
atgggcctaagcgatgtcaaacattgtggcaaaatgcgagcactggaaaagctgatgttc
tcatggctttcagagggcgataaagtacttttgttcagttactctgtcaggatgctggac
atactggaaaaatttcttattcgcagaggctactgcttctcaagactcgatggttccact
ccaagtaacttgcgccagtctctagttgatgacttcaattcaagtccaagcaaacaagtt
ttccttatatcaactcgagctggtgggcttggattgaatcttgtcagtgcaaatcgtgtg
gtaatatttgatccaaactggaatcctgcccaagacttacaggcccaggataggtccttt
cggtatgggcagaagcggcatgttgtggttttccgccttcttgcagccggttcccttgag
gaacttgtttattcccgtcaagtgtacaaacagcagctatcaaatattgctgtttctgga
aaaatggaaaaacgatattttgaaggtgtccaggattgcaaggaatttcaaggcgagctt
tttggaatctgcaatttatttcgtgatctatctgataagctctttacaagtgagatcatt
gaattacatgaaaagcagggtctagaagatgggcatcatcttattacaaaacaagggttg
actgaacttggaaacaattttgattcatcaaaagaagtgggtgtgatattttcatctgag
tctgaaaccagggtgcctggtgattctaagtgggctaaaacaagtaaaccagcttttgaa
gacatgggaattgtatatgctcatcgtaatgaagacgtagtcaatgttggagctgggatt
caagggaagatggatttaagcagcaaccctcagaatgataggcttaaccagccatgcatc
cctatggcaaggagaagcaaagcagagtgtggaagtgagagagagaatatttcttcaatc
aaagacaagaagaggagacaatacagcctccttgctcagtttgtgggtgtgggagagctt
gaatttagcaagtggttactttctgcaactcctttggagagggagaaagtgcttcgagac
ttcaaaaagaggaaggagaaggtacctaatggttaa