KEGG   Alnus glutinosa (common alder): 133860910
Entry
133860910         CDS       T10577                                 
Name
(RefSeq) switch 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
aglu  Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aglu03400]
    133860910
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    133860910
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD SWI2_SNF2
Other DBs
NCBI-GeneID: 133860910
NCBI-ProteinID: XP_062152557
LinkDB
Position
2:9032638..9044005
AA seq 891 aa
MSLHLFKETLRPCTKNPLPSLSSASITHSFDPIIPRKPPKSSLSQQLLRLQDPDSLPPIQ
PRRSTKQPQGHSGDGRNEEAEKEEEEEKQKAPGPKGFGRTTKLGQFQFDHTGPFEPLVLS
SQNDIPLVQVPASINCRLLEHQREGVKFLYNLYKNNHGGILGDDMGLGKTIQTIAFLAAV
YGKDGEGVHSTILKENQVGKKDPVLIICPTSVINNWESEFSKWATFSVSVCHGANRDLIY
EKLEVCAVEILIASFDTYRIHGGILSKVKWEIVVVDEAHRLKNEKSKLYGACSEIKTQKR
FGLTGTVMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPERFLRVADER
KQHLVAVLRKYMLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYSRMLQLPEVQCLVNK
DLPCSCGSPLTQVECCKRTVPNGIIWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLE
LIKPNPKDDPDKRRKDAEFASAVFGPDIDLAGGNTQSESFMGLSDVKHCGKMRALEKLMF
SWLSEGDKVLLFSYSVRMLDILEKFLIRRGYCFSRLDGSTPSNLRQSLVDDFNSSPSKQV
FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLE
ELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEII
ELHEKQGLEDGHHLITKQGLTELGNNFDSSKEVGVIFSSESETRVPGDSKWAKTSKPAFE
DMGIVYAHRNEDVVNVGAGIQGKMDLSSNPQNDRLNQPCIPMARRSKAECGSERENISSI
KDKKRRQYSLLAQFVGVGELEFSKWLLSATPLEREKVLRDFKKRKEKVPNG
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgtcactgcacctcttcaaagaaaccctcaggccctgcacaaaaaacccgttaccatcg
ctgtcctccgcatccataacccacagctttgaccccataatccctagaaaaccccccaag
tcgtctctctcacagcagcttctgcgcctccaagacccagactctctgcccccaattcaa
ccccggcgttcaactaagcaacctcaaggccatagtggtgatggaagaaatgaagaagca
gagaaagaagaagaagaagagaaacagaaagcgccaggaccaaaagggtttgggagaacc
accaaattgggtcaatttcagtttgatcatacaggaccatttgagccattggttttgtcc
tcacagaatgacattccactagtacaggttcccgcatctatcaactgtaggttgcttgaa
catcaaagggagggagtgaagtttttatataatttatacaagaacaaccatgggggcatc
cttggagatgacatgggacttggcaagaccattcaaacaattgccttcctggctgctgtg
tatggtaaagatggagaaggtgttcattctaccatactgaaggaaaatcaggttggaaaa
aaggacccagtactaataatttgcccgacttctgttatcaacaattgggagagtgaattc
tctaagtgggcgacctttagtgtttctgtttgccatggtgctaaccgcgatctgatatat
gagaaattagaagtatgtgcagttgagatacttattgccagttttgacacatacagaatt
catggtggaatattgtctaaggttaaatgggagattgtagttgttgatgaggcgcaccgg
cttaagaatgagaagtcaaagctctatggagcatgttcagaaattaaaactcaaaaacgt
tttggtctgacaggaaccgtaatgcagaataaaataatggaattgtttaatctctttgac
tgggttgcaccagggtccttgggaacacgggaacatttccgggagttttatgatgaaccc
ctcaagcatggtcagaggtcaactgctcctgaaagatttttacgggttgctgatgagcga
aaacagcatctagtggcagttcttcgtaaatatatgttaagaaggacaaaggaggagact
attgggcatcttatgatggggaaggaggataatgtcgtgttctgtgccatgagtgaattg
cagaaacgggtgtacagtagaatgttacaactaccagaagtccaatgccttgtaaataag
gaccttccatgtagctgtggaagccctcttactcaagtcgaatgttgcaaaaggactgta
ccaaatggaatcatttggccttaccttcacagggacaacccagatggttgtgattcgtgc
cccttttgccttgtccttccttgccttgtcaagttgcaacagataagcaatcacctggaa
ttgattaagcctaaccccaaggatgacccagataaacgaaggaaagatgcagagtttgcc
tcggctgtctttggccctgatattgatttggcaggagggaatacccaaagtgagagtttc
atgggcctaagcgatgtcaaacattgtggcaaaatgcgagcactggaaaagctgatgttc
tcatggctttcagagggcgataaagtacttttgttcagttactctgtcaggatgctggac
atactggaaaaatttcttattcgcagaggctactgcttctcaagactcgatggttccact
ccaagtaacttgcgccagtctctagttgatgacttcaattcaagtccaagcaaacaagtt
ttccttatatcaactcgagctggtgggcttggattgaatcttgtcagtgcaaatcgtgtg
gtaatatttgatccaaactggaatcctgcccaagacttacaggcccaggataggtccttt
cggtatgggcagaagcggcatgttgtggttttccgccttcttgcagccggttcccttgag
gaacttgtttattcccgtcaagtgtacaaacagcagctatcaaatattgctgtttctgga
aaaatggaaaaacgatattttgaaggtgtccaggattgcaaggaatttcaaggcgagctt
tttggaatctgcaatttatttcgtgatctatctgataagctctttacaagtgagatcatt
gaattacatgaaaagcagggtctagaagatgggcatcatcttattacaaaacaagggttg
actgaacttggaaacaattttgattcatcaaaagaagtgggtgtgatattttcatctgag
tctgaaaccagggtgcctggtgattctaagtgggctaaaacaagtaaaccagcttttgaa
gacatgggaattgtatatgctcatcgtaatgaagacgtagtcaatgttggagctgggatt
caagggaagatggatttaagcagcaaccctcagaatgataggcttaaccagccatgcatc
cctatggcaaggagaagcaaagcagagtgtggaagtgagagagagaatatttcttcaatc
aaagacaagaagaggagacaatacagcctccttgctcagtttgtgggtgtgggagagctt
gaatttagcaagtggttactttctgcaactcctttggagagggagaaagtgcttcgagac
ttcaaaaagaggaaggagaaggtacctaatggttaa

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