Alnus glutinosa (common alder): 133870978
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Entry
133870978 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133870978
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133870978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133870978
03041 Spliceosome [BR:
aglu03041
]
133870978
03032 DNA replication proteins [BR:
aglu03032
]
133870978
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133870978
Spliceosome [BR:
aglu03041
]
Complex A
U1 snRNP components
Sm proteins
133870978
U2 snRNP components
133870978
Complex B
U1 snRNP components
133870978
U4/U6.U5 tri-snRNP components
133870978
Complex C
U2 snRNP components
133870978
DNA replication proteins [BR:
aglu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133870978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
133870978
NCBI-ProteinID:
XP_062164282
LinkDB
All DBs
Position
1:complement(9039352..9045711)
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AA seq
273 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPS
NEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAALAGPGIGRAAGRGVSTA
PLIQAQPGLAGPVRGVGGPAPGMMQPQQMARPQLSAPPMTYPTPPVIRPPSQMPPPPYPG
QGQAPPPPMVRGPPPPGQFGGRPGGGMPQPFPMQFAQRPMGPPPPGQMMRGPPPPPRPGM
PPPPPGGAVPVFGPPRPGMPPPPNPQNHQQQQQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagttcgaagatgctccagtacatcaactacaggatgcgggtcaca
atccaggacgggcggcagctggtggggaagttcatggccttcgaccgccacatgaatctc
gtactcggcgactgcgaggagttccgcaagcttcccccggccaaaggcaagaagcccagc
aacgaggagcgcgaggaccgccgcacactcggcctcgtcctcctccgcggagaagaggtc
atttccatgaccgtggagggcccaccacctcccgaggagtcccgcgccaaggctgtcagc
gctgctgccctggcgggacccgggataggccgcgctgctggaagaggggtttctacggcg
ccgctcattcaggcacagcctggcctagctgggcccgtccgcggcgtgggtgggcctgca
ccaggtatgatgcagccacaacagatggcgcgcccgcagctttcggctccgcccatgacg
tacccgactccgccagtgatccggccgccttcccagatgccgccacctccgtatccaggg
caggggcaggctcctccaccgcctatggtgcggggacctccaccccctgggcagtttggc
gggaggccgggtggggggatgccgcagccgttccctatgcagtttgcgcagaggccaatg
gggccaccaccgccgggtcagatgatgagaggacctccgccaccgcctcgccctgggatg
cccccgccaccgcctggtggtgctgttcccgttttcgggcctccccgtccgggcatgccg
cctccgccaaaccctcaaaatcatcagcagcagcaacagtga
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