Agromyces badenianii: DCE93_04535
Help
Entry
DCE93_04535 CDS
T05411
Symbol
kgd
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
agm
Agromyces badenianii
Pathway
agm00020
Citrate cycle (TCA cycle)
agm00630
Glyoxylate and dicarboxylate metabolism
agm00785
Lipoic acid metabolism
agm01100
Metabolic pathways
agm01110
Biosynthesis of secondary metabolites
agm01120
Microbial metabolism in diverse environments
agm01200
Carbon metabolism
agm01210
2-Oxocarboxylic acid metabolism
Module
agm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCE93_04535 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
DCE93_04535 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DCE93_04535 (kgd)
Enzymes [BR:
agm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
DCE93_04535 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
DCE93_04535 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
DCE93_04535 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
DCE93_04535 (kgd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-oxoacid_dh
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AWB95014
UniProt:
A0A2S0WUV7
LinkDB
All DBs
Position
complement(946612..950370)
Genome browser
AA seq
1252 aa
AA seq
DB search
MSSQLTGSGSDETTSAEYGANEWLVDEMYEKFLVDPQSVDKTWWPVLEHYRQVKTGGGEP
SATAPADAAASAPQAEAAAPAAPAAPAAAAEAAPATAPVPVIGQTPEARTTSTAPRTAPV
PADVPVTSPQPVIAEAVREDEVVALRGMPKALAANMDASLTVPTATSVRTIPAKLMIDNR
IVINNHLRRSRGGKISFTHLIGWALIQALKDFPSQNVYYAEPDGKPSVVKPAHIGLGIAI
DVPKPDGTRALLVPAIKRAETMTFNEYLAAYEDLVQRARQNKLTADDFSGATISLTNPGG
IGTVHSVPRLMKGQGCIIGAGALEYPAEFQGASEKTLANLAIGKTITLTSTYDHRVIQGA
GSGEFLKKVHELLLGQRGFYENLFGALRLPYEPIRWAPDISVDIASAIDKTARVQELINS
FRVRGHLMADIDPLEYVQRSHPDLDIASHGLTFWDLDREFVTGGFGEKRTALLRDILGVL
RDSYCRTIGIEYMHIQDPVQRRWIQEQIERNYEKPTHDEQMRILGKLNEAEAFETFLQTK
YVGQKRFSLEGGESVIPLLDEILQGAAKEGLDEVAIGMAHRGRLNVLTNIAGKTYGQVFR
EFEGTQQSKGFSGSGDVKYHLGTQGTFTADDGHQIPVSLAANPSHLEAVDGVLEGIVRAK
QDRKPIGTFSTLPILVHGDAAMAGQGVVLETLQMSQLRGYRTGGTIHVVVNNQVGFTTVP
GDARSSIYSTDVAKTIQAPILHVNGDDPEAVVRVAELAFRYRQEFKRDVVIDLVCFRRRG
HNEGDDPSMTQPLMYNLIEAKRSVRKLYTEALVGRGDITEAEYEEAHRDFQDRLERAFAE
THAAQTGAIPIVGATDSAAPSEPAAGELETTGVTTEVVHAIGDAFNNKPSGFTVHAKIQQ
LLTKRFEMSRNGKIDWGFGELLALGSLLLEGTPVRLAGQDARRGTFVQRHAVLHDRANGQ
EWLPLQNLSDNQARFWIYDSLLSEYAAMGFEYGYSVERADALVMWEAQFGDFANGAQTII
DEFISSAEQKWGQRSSVVLLLPHGYEGQGPDHSSARIERYLQLCAENNMTVARPSTPASY
FHLLRRQAYARPRKPLVVFTPKAMLRLRGATSEVADFTQGKFEPVIDDARITDRAAVKRA
VFVSGKIYYDLITELEKQQNTEVAVVRLEQLYPLPAAELKAVAESYPNAELMWAQDEPEN
QGAWPYFIIETNKLGARPVKVVARAAAASPATGSAKRHAAEQAELVRHATTL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagccaattgaccgggtcaggttccgacgagacgacgtcggccgagtacggagcc
aacgaatggctcgtcgacgagatgtacgagaagttcctcgtcgatccgcagtcggtcgac
aagacctggtggccggtgctcgagcactaccgccaggtgaagaccggaggcggcgagcca
tcggccaccgccccggcggatgccgcggcatccgccccacaggccgaggccgccgcgcct
gcggcacccgcggccccggccgcggccgccgaggctgccccggcgaccgccccggtgccc
gtcatcgggcagacccccgaggcccgcactacctcgaccgccccgcgcactgcgccggta
ccggccgacgtgccggtgacgagcccgcagccggtcatcgccgaggccgtccgtgaagac
gaggtcgtggcgttgcggggcatgccgaaggccctcgccgcgaacatggacgcctcgctg
accgtgccgaccgccacgagcgtccgcacgatcccggcgaagctcatgatcgacaaccgc
atcgtgatcaacaaccacctgcggcgctcgcgcggcggcaagatctcgttcacgcacctc
atcggctgggcgctcatccaggcgctcaaggacttcccgagccagaacgtctactacgcc
gagcccgacggcaagcccagcgtcgtcaagccggcccacatcggcctcggcatcgcgatc
gacgtcccgaagcccgacggcacccgggcgctcctcgtgcccgcgatcaagcgcgccgag
acgatgacgttcaacgagtacctcgcggcctacgaagacctcgtgcagcgcgctcgccag
aacaagctgacggccgacgacttctcgggcgccacgatctcgctgacgaaccccggcggc
atcggcaccgtgcactcggtgccgcgcctcatgaagggccagggctgcatcatcggcgcc
ggcgccctcgaataccccgccgagttccagggcgcctccgagaagacccttgccaatctc
gcgatcggcaagacgatcaccctgacctcgacgtacgaccaccgcgtcatccagggcgcg
ggctcgggcgagttcctgaagaaggtgcacgagctgctgctcggccagcgcgggttctac
gagaacctcttcggcgcccttcgcctgccctacgagccgatccgctgggcacccgacatc
tccgtcgacatcgcgagcgcgatcgacaagaccgctcgcgtgcaggagctcatcaactcc
ttccgcgtgcgcggccacctgatggccgacatcgacccgctcgagtacgtgcagcgctcg
caccccgacctcgacatcgcgagccacggcctgaccttctgggacctcgaccgcgagttc
gtcactggcggcttcggcgagaagcgcacggccctgctccgcgacatcctcggggtgctg
cgcgactcgtactgccgcaccatcggcatcgagtacatgcacatccaagaccccgtgcag
cgtcgctggatccaggagcagatcgagcgcaactacgagaagcccacccacgacgagcag
atgcgcatcctcggcaagctcaacgaggccgaggcgttcgagaccttcctgcagacgaag
tacgtcggccagaagcgcttcagcctcgagggcggcgagtccgtcatcccgctcctcgac
gagatcctgcagggcgccgccaaagaggggctcgacgaggtcgccatcggcatggcgcac
cgcggccgcctcaacgtgctcacgaacatcgcgggcaagacctacggccaggtgttccgc
gagttcgagggcacgcagcagtcgaagggcttctcgggctcgggcgacgtgaagtaccac
ctcggcacccagggcaccttcaccgccgacgacggccaccagatccccgtctcgctcgcg
gcgaacccctcgcacctcgaggccgtcgacggcgtgctcgagggcatcgtgcgggccaag
caagacagaaagcccatcggcaccttctcgacgctgccgatcctcgtgcacggagatgcc
gcgatggccggccagggcgtcgtgctcgagacgctgcagatgtcgcagctccgcgggtac
cgcaccggcggcaccatccacgtcgtcgtcaacaaccaggtgggcttcaccaccgtgccg
ggtgacgctcgctcctcgatctactcgacggatgtcgcgaagaccatccaggcgccgatc
ctgcacgtgaacggcgacgaccccgaggccgtcgtgcgggtggccgagctcgcgttccgc
taccgccaggagttcaagcgcgacgtcgtcatcgacctcgtctgcttccgccggcgcggc
cacaacgagggcgacgacccctcgatgacccagccgctcatgtacaacctcatcgaggcc
aagcgctcggtgcgtaagctctacaccgaagcgctcgtcggtcgcggcgacatcaccgag
gcggagtacgaagaagcgcaccgcgacttccaagaccgcctcgagcgcgccttcgccgag
acccacgccgcccagaccggggcgatcccgatcgtcggcgcgaccgactcggcggctccg
tccgaaccggccgcgggcgagctcgagaccaccggtgtcacgacagaggtcgtgcacgcc
atcggcgacgcgttcaacaacaagccctcgggcttcaccgtgcacgcgaagatccagcag
ttgctgacgaagcgcttcgagatgagccgcaacggcaagatcgactggggcttcggcgag
ctgctcgcgctcggttcgctcctcctcgagggcaccccggtgcgcctggcgggccaggac
gcccgaaggggcacgttcgtgcagcgccatgccgtgctgcacgaccgcgcgaacggccag
gaatggctgcccctgcagaacctctccgacaaccaggcgcggttctggatctacgactcg
ctcctctccgagtacgcggcgatgggcttcgagtacggctactcggtcgaacgggccgat
gccctcgtcatgtgggaggcgcagttcggcgacttcgccaacggcgcgcagaccatcatc
gacgagttcatctcctcagccgagcagaagtggggccagcgctccagcgtcgtgctcctc
ctcccccacggctacgaggggcagggtcccgaccactcgagcgcccgcatcgagcggtac
ctccaactctgcgccgagaacaacatgaccgttgcgcggccctccacgccggcgtcgtac
ttccacctgctgcgtcgccaggcctacgcccggccgcgcaagccgctcgtcgtcttcacc
ccgaaggcgatgctgcgcctgcgaggcgcgaccagcgaggtcgccgacttcacgcagggc
aagttcgaaccggtcatcgacgacgcccgcatcaccgaccgcgccgcggtcaagcgcgcg
gtgttcgtctcgggcaagatctactacgacctgatcaccgagctcgagaagcagcagaac
accgaggtggcggtcgtgcgcctcgagcagctctacccgctgcccgccgccgagctgaag
gccgttgccgagtcgtacccgaacgccgagctgatgtgggcgcaagacgaacccgagaac
cagggcgcgtggccgtacttcatcatcgagacgaacaagctgggcgcgcgtcctgtcaag
gtcgtcgcccgtgccgccgcggcatcgcccgcgacgggctccgcgaagcggcacgccgcc
gagcaggcggagctcgtgcgtcacgccacgacgctctag
DBGET
integrated database retrieval system
