Agarivorans sp. B2Z047: LQZ07_12235
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Entry
LQZ07_12235 CDS
T08685
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq01501
beta-Lactam resistance
agq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQZ07_12235
01503 Cationic antimicrobial peptide (CAMP) resistance
LQZ07_12235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agq03036
]
LQZ07_12235
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agq02000
]
LQZ07_12235
01504 Antimicrobial resistance genes [BR:
agq01504
]
LQZ07_12235
Chromosome and associated proteins [BR:
agq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LQZ07_12235
Transporters [BR:
agq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LQZ07_12235
Antimicrobial resistance genes [BR:
agq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LQZ07_12235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
RND-MFP_C
BSH_CzcB
Beta-barrel_RND
BSH_CusB
Biotin_lipoyl
BSH_YhbJ
HH_MFP_RND
BSH_YknX
BSH_LcnD
CzcB_C
MIP
Motif
Other DBs
NCBI-ProteinID:
UQN45193
LinkDB
All DBs
Position
complement(2642368..2643465)
Genome browser
AA seq
365 aa
AA seq
DB search
MYLRYVLPPVLIICMIALIVINQQSTNGNPARSLAPTLVTTEQVQQHSLAQNLSLIGTLD
AEQSVAIAAEVSGKINQINVRSNQRVQAGDVLVKLNDLKASAALAEARAYLADEQRKLYE
FEQLLKRKAVSQTSFDAQLASVTIAKARLQSAQSEFDDHTLTAPFTGVTGLINISNGELI
NANQSLLSLDNLSSLQLDLNVPDQYLSLLSKGMPIQATTPAWPQQIFEGTIDAIDPRVDS
NTLNLTVRVNFDNTNKQLKPGMMMRAKLTLPAATQAMIPVQAIEYSGTKRFVYVVGENNI
AHRTEVQLGARINNYVLIDQGLALNDNIVVQGLVNIRDGARIKQVDTKVAKSKQLADEKA
TQEPI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtacttacgttatgttttaccgccagttctcattatttgcatgatcgctctaatagtg
atcaatcagcagtctacaaatggcaacccagcgcgtagccttgcccccactttggtaaca
acagagcaagtgcaacaacatagcctagctcaaaacctgagcttaattggcaccttggat
gccgaacagtcggtggctattgctgcagaagtcagcggcaagattaatcaaatcaatgtg
cgctctaatcaacgagttcaagctggcgacgtattagttaagctaaacgacttaaaagcc
agtgcagccttggcagaagcaagagcctacttggccgacgagcaacgcaaactgtatgaa
tttgaacaactgttaaaacgtaaggcggtttcgcaaaccagttttgatgcgcaactggcc
agcgtaacgattgccaaagcaagattacagtcagcgcaatctgagtttgatgatcacacc
cttaccgcgccttttactggggttactggtttaatcaacatcagtaacggtgaactgatt
aacgcaaatcaatcgctactcagcttagacaacttatcaagcctacaactcgacctaaat
gtgcccgaccaatatttgtctctattatccaaaggcatgcctatacaagccacaaccccg
gcttggccgcagcagatctttgaaggcaccatcgacgccatagacccgcgagtagacagc
aatacccttaacctcactgtgcgagttaacttcgacaacaccaataagcaattaaaaccg
ggcatgatgatgcgcgctaagctcaccttgccagcagccactcaagcaatgatccctgtg
caggctattgaatactctggcaccaaacggtttgtatatgtggttggagaaaacaatatt
gctcatcgcaccgaagttcagctaggtgcgcgtattaataactacgtactaatcgaccaa
ggtttagcattaaatgacaacattgtagtacaaggcctagtgaatattcgcgacggcgct
cggattaaacaagtagacaccaaagtcgctaagtcgaaacaactcgccgatgaaaaagcc
actcaggagccaatttaa
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