Agarivorans sp. B2Z047: LQZ07_13260
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Entry
LQZ07_13260 CDS
T08685
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq01501
beta-Lactam resistance
agq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQZ07_13260
01503 Cationic antimicrobial peptide (CAMP) resistance
LQZ07_13260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agq02000
]
LQZ07_13260
01504 Antimicrobial resistance genes [BR:
agq01504
]
LQZ07_13260
Transporters [BR:
agq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LQZ07_13260
Antimicrobial resistance genes [BR:
agq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LQZ07_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Phage_tail_terminator_5
Motif
Other DBs
NCBI-ProteinID:
UQN40748
LinkDB
All DBs
Position
complement(2878766..2881903)
Genome browser
AA seq
1045 aa
AA seq
DB search
MSLSNFFINRSIFAWVIAIVTMLAGLAAIFTLPVAQYPTIAPPAVTISASYPGASAKTIE
DSVTQVIEQGMTGLDNLLYMSSKSDSSGSASITLTFSAETDPDIAQVQVQNSLQQVSNRL
PSAVQNQGTSVTKSTSGFMSVTNLYSPDGSMSAGDIQDYANSNIKDIVSRVNGVGSVTVF
GPSYAMRIWLDPAKLNSYSLTPVDVSNAVSVQNSQVTVGQLGGTPALDSQLINASITAQS
LLTSVDQFEDILIKVDSDGSQIKLKDIARVELASENSSTIPAYMGQEASGIAITLATGAN
SLDTQTAVDEKLQQLSKGFPEGLALVKSTDNNLFIRISISEVVKTLFEAVALVFFVMLLF
LQNFRATLIPTIAVPVVLLGTFAVMSLLGFSINTLTMFGMVLAIGLLVDDAIVVVENVER
LMHDEKLSPLEATKKSMGQITSALIGITMVLSVVFVPMAFMSGSTGVIYQQFSLTIVSAM
VLSVIVALVLTPVLCATLLKPVDRTESNKFFALFNQGFNKVSSAYRGSVKHTLQRPLRFV
FIYLLLFAGTAYLYHSLPSSFLPNEDQGDFMVMVTTPTGTTLQKTQEAMLDVKDYFEQNE
SDTVNHIFTVSGFNFSGSGQNAGMAFIGLKDWSERTALGTDVDAIIGRAMGHFSTYKNAQ
IFAFSSPPIRELGTATGFNFYLEDVGALGHDKLIEVRNQLLGAIAQSPVLQNTRPNGLED
NAQLFLDVDYEKAKVLGLEINDINQSLSIAWASSYVNDFIDRGRSKKVYIQADAQYRMTP
EDLDLWFIRNNQNEMVPISAFSTSHWGKGSPQLQRYNGNPAVEIVGEAAEGYSTGEAMDE
VNRLAAEISNDVQVSWTGMSYQEIEAGDQAPILYAISILMVFLCLAALYESWSIPIAIIL
VVPLGLLGALAAIMLRGLENDVYFQVGVLTTIGLTAKNAILIVEFAKELYDKGVNLLDAT
VQACEMRLRPIIMTSLAFGLGVLPLVISTGAGANARNAIGTSVMGGIMAATLLVIYFAPL
FFVLICKLFKANKKPVVLNTAEKTV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatccaatttctttattaataggtcaatttttgcgtgggtaattgcaatcgtt
actatgttagccgggcttgcagctatctttaccctgcccgttgctcagtatccaactatt
gcgcctcctgcagtaacaatatcagcgtcttacccaggtgcatcagcaaaaacaattgaa
gacagcgttactcaggttattgaacaaggcatgaccggcttagataacctactctacatg
tcgtctaaaagtgattcttcgggtagcgcaagtattacgcttacctttagtgccgaaacc
gatccagatattgctcaagttcaggttcaaaatagcctgcaacaagtgagtaatcgcctg
cctagtgcagtacaaaaccaaggcacctcggtaacaaaaagtacctctggttttatgtcg
gtcaccaacctctactcacccgacggcagcatgagtgcgggtgatattcaagactatgca
aattccaacattaaagacattgttagccgagttaatggggttggtagcgtaactgttttt
ggaccatcttatgcgatgcgtatttggttagatcctgccaaacttaatagctatagccta
accccagttgatgtatctaatgctgtatccgtgcaaaacagccaagtaactgttgggcaa
ctgggtggcacaccagctctagactctcagttgatcaacgccagtatcactgcgcaaagc
ttgctaactagcgtcgaccagtttgaagacattttgattaaggttgatagcgatggttcg
cagatcaaacttaaagacatcgcacgtgtagagttagccagcgaaaactcctcaactatt
cctgcttatatggggcaagaggcatcgggcattgcaattaccctagcaaccggggctaat
tcgcttgatacgcaaaccgcggtagacgagaaacttcagcaactttctaagggctttcca
gaaggtttagcgctagttaaatcaacagataacaacctatttatccgtatttcaattagc
gaagtagtaaaaacactattcgaagcagtagccctcgtgttctttgttatgctgctgttt
ttacaaaactttagagcaaccttgattcctaccattgcagtacccgtagtattgctaggt
acatttgcagtgatgtcgttattaggtttctctattaacacactcacaatgtttggcatg
gtgttggcaattggtttgctggtagatgacgctatcgtagtcgtagaaaacgtagaacgc
ctaatgcacgacgagaagttgtcgccgctagaggctaccaaaaaatcgatggggcaaata
accagcgcgcttatcggcattaccatggtcttgtcggtggtgtttgttccaatggccttt
atgtcgggctcaaccggagttatttaccagcagttctcgttaaccattgtatcggccatg
gtgttatcggtaattgtagccttggtgcttacgcctgtgctttgcgcaaccttacttaag
ccggttgatagaaccgagagtaataaattctttgcgttatttaaccaaggcttcaacaaa
gtatcttcggcataccgaggatcggttaaacacacattgcagcgccctcttcgctttgta
ttcatttatctgctgctatttgctggtactgcgtatttatatcactcgctgcctagctcg
ttcttgccgaacgaagaccaaggcgactttatggtaatggtaaccacgcccaccggaaca
accttacaaaaaactcaagaagcgatgctggatgtaaaagactattttgaacaaaatgaa
tcggatacggttaatcacatattcacagtgtcgggtttcaacttttcaggttctggtcaa
aacgcgggtatggcttttattggtttgaaagattggtctgagcgaaccgcactcggtacc
gatgtcgatgccattattggccgcgcaatgggccatttttctacttacaaaaacgcgcaa
atatttgcctttagtagcccgccaattagagagttaggcacagctaccggttttaacttt
tacttagaagacgtaggcgcgttaggccacgacaaactaatcgaggtgcgcaatcaatta
ctaggtgcaattgcgcaaagccctgtgcttcagaatacacgaccaaatggcctagaagat
aacgcacagctgttcctagacgtagactacgaaaaagccaaagtgctgggcctagaaatt
aacgatattaaccagtctttatctattgcttgggcttcctcttacgttaacgattttatc
gaccgaggacgctccaaaaaggtatatattcaagcagacgcacaataccgtatgacaccc
gaagatctcgatttatggtttattcgcaataaccaaaacgaaatggtgcccatctctgca
tttagtacatcacactggggcaaaggctcaccgcagctgcaacgttataacggtaatcct
gcggtagaaattgtaggcgaagcggccgaaggttacagcaccggcgaagcaatggacgaa
gttaatcgtttagcagcagaaatatctaacgatgtacaagtaagttggaccggtatgtca
tatcaagaaattgaagcgggtgaccaagcccctattctgtacgccatctcaattttaatg
gtattcctttgtttagcagcactatacgaaagctggagcattccaattgcaattattctg
gttgttccgcttggcttactgggggctttggcggctattatgttgcgcggcctagagaac
gacgtttacttccaagtaggcgtgttaaccaccattggcctcaccgctaaaaatgccatt
ttaattgtagagtttgctaaagagctctacgacaaaggcgtgaatttgttagatgccacc
gtgcaagcctgtgaaatgcgtttgcgccctatcattatgacctcactggcatttggctta
ggtgtattgcccttagtaataagtactggcgctggagcaaatgcgcgtaatgctattggt
acttcggtaatgggcgggataatggcggcaacattgttggttatctactttgcgcccttg
ttctttgtgctcatttgtaaactgtttaaggccaacaaaaagccagttgttttaaatact
gcagagaaaacggtttag
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