Agrobacterium sp. CGMCC 11546: GSF67_12825
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Entry
GSF67_12825 CDS
T10431
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc00020
Citrate cycle (TCA cycle)
agrc00270
Cysteine and methionine metabolism
agrc00620
Pyruvate metabolism
agrc00630
Glyoxylate and dicarboxylate metabolism
agrc00680
Methane metabolism
agrc00710
Carbon fixation by Calvin cycle
agrc00720
Other carbon fixation pathways
agrc01100
Metabolic pathways
agrc01110
Biosynthesis of secondary metabolites
agrc01120
Microbial metabolism in diverse environments
agrc01200
Carbon metabolism
Module
agrc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agrc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agrc_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GSF67_12825 (mdh)
00620 Pyruvate metabolism
GSF67_12825 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
GSF67_12825 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
GSF67_12825 (mdh)
00720 Other carbon fixation pathways
GSF67_12825 (mdh)
00680 Methane metabolism
GSF67_12825 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GSF67_12825 (mdh)
Enzymes [BR:
agrc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
GSF67_12825 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
QKW97887
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Position
1:complement(2501559..2502524)
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AA seq
321 aa
AA seq
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MARKKIALIGSGMIGGTLAHLASLKELGDIVLFDIADGIPQGKGLDIAQSGPVEGFNAKL
SGASDYAAIEGADVCIVTAGVARKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPKNKVVGMAGVLDSARFRLFLAEEFNVSVQDVTAFVLGGHGDTM
VPLARYSTVGGVPLTDLVKMGWLTAERLEQIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESYLKDKKRVLPAAAHLSGQYGVDDMYVGVPTIIGAGGIERVIEIELNKEEEAAFQK
SVGAVAGLCEACINIAPSLKS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaaaaaaattgcacttattggttctggcatgatcggcggcacactggcgcat
ctcgccagcctgaaggaactgggcgatatcgtcctcttcgacatcgccgacggcatcccg
cagggcaagggtctggatattgcccagtccggcccggttgaaggcttcaatgcaaagctc
tccggcgcttccgattacgccgccatcgaaggcgcagacgtctgcatcgtcaccgcaggt
gtcgcccgcaagcccggcatgagccgcgatgatcttcttggcatcaacctcaaggtcatg
gaacaggtcggcgccggcatcaagaaatatgctccgaacgctttcgtgatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcagaagttctccggcctgccgaagaacaag
gtcgtcggcatggctggcgttctcgacagcgcacgcttccgcctgttccttgccgaagaa
ttcaacgtttcggtccaggacgtcaccgccttcgttctcggcggtcatggcgacaccatg
gtgccgctcgcccgttattccaccgttggcggcgttccgcttaccgatctcgtcaagatg
ggctggttgaccgccgaacgtcttgagcagatcatccagcgcacccgtgacggcggcgcg
gaaatcgtcggcctcttgaagaccggctcggcctattacgcgccggccgcttcggctatc
gaaatggccgaatcctacctcaaggacaagaagcgcgttctgcccgctgctgcccacctc
tcgggccagtatggcgtagacgacatgtatgtcggcgtgcccaccatcatcggtgccggc
ggtatcgagcgcgtcatcgagatcgaactgaacaaggaagaagaagccgccttccagaaa
tccgtcggcgctgtcgctggtctttgcgaagcctgcatcaacatcgctccgtcgctgaag
tcataa
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