Apium graveolens (celery): 141665372
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Entry
141665372 CDS
T11340
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
agrv Apium graveolens (celery)
Pathway
agrv04075
Plant hormone signal transduction
agrv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141665372
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
141665372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141665372
Transcription factors [BR:
agrv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
141665372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
141665372
NCBI-ProteinID:
XP_074327460
LinkDB
All DBs
Position
1
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AA seq
738 aa
AA seq
DB search
MPLSEFYETLNSKGKVEGSRSTDLAFVPNNGLVELVCENGQIMMQDQSLNRKAPKIPTNN
FHFQTPRYLDKDVVNEPASKVGKYGNIGSIYSDITTSAPSTEPVVTHDDDMAQWFNYPIG
DSLQQDYCSDFLPELSSVTVNESSMHNSFASIEKRDRYNQVVRNSESGSVQNNELGSGQG
SAPKPPPSKYAPLYHWSGPQGQASVSSVGSRVSAMQHDVSGNLVSSQAPASHLPHTKIHK
QDSGLPRSNSSLLNFSHFSRPAAMARANIQNASTVSPLVSSAADRMIENDNLPPSNGRNP
AESTHLNQNGIPRKEISYHTQPNFVSSKVDFKRAEPIQLEESLPRGRSDAVCREDANNSN
NKKDKPSNPDLGGNTAKRLPENEKAGEPVGASSSVCSGNSVEKTSNDRKINMKRKKCRDA
EESEGQSEDLEEECAGAKKAAPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELI
PNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLPTGMQQFHAAHLPHFSPM
GVGMGMGMGMGFGMNMLDMNGGPRGCSMIPMSSMQGAHFPSPPMSASANFQGVGGGHLPV
FGHPSQGFPMSAAGAHLAPSNSAGGMIGLKMGVNVEVSNAVPAPTMESKNLIKNANLQDM
QSAETRISLNPQSSQFHATNEEFDQSALARETDQGPDGSRPDVGGGADDNSTRNNDTLPS
RDPMNLHFYLQVVIDSNN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctcggagttttacgaaacattgaattcaaaggggaaggttgaaggttcccgt
tctactgatcttgctttcgtacctaacaatgggcttgttgagttggtatgcgaaaatggt
caaattatgatgcaagatcagtcccttaatagaaaggctcccaagatcccgaccaacaat
tttcattttcagacacctcgatatcttgataaggatgtagtcaatgaacctgcctccaaa
gttggaaagtatggaaatattggttctatatatagtgatattactacgtctgcaccatct
actgaaccagttgtgactcatgatgatgatatggcacagtggtttaactatcccatcgga
gatagtcttcaacaggactactgttctgatttcctacctgagttatctagtgttactgta
aatgaatcctcaatgcacaatagttttgcttcaatagagaagagagatcgttataatcaa
gtagttaggaattcagaaagtggttcagtacaaaataacgagttgggctcagggcaagga
agtgcacctaagccgcctccttcaaaatatgcaccattatatcattggtcagggccacaa
gggcaagcatcagtatcgtctgttggatcaagagtttcggcgatgcaacatgatgtttct
ggaaatctagtttcttctcaagctcccgcaagtcatctccctcacacgaagatacataag
caagattctggattgcctagaagtaactctagcttgttgaacttctctcatttctcgaga
cctgctgccatggctagagctaatattcaaaatgcttctactgtttcccctctggtctca
tcagccgcagataggatgatagagaatgataatctgcctccttctaatggtagaaatccg
gcagaatctacacatctcaaccagaatggtataccaagaaaagaaataagctatcatact
cagcctaattttgtgtccagtaaggtagattttaaaagagcagagcctatacaactggag
gagtcacttcctcgtggaagatctgatgctgtttgtagagaagatgccaataatagtaac
aataagaaggacaagccatctaatccagatcttggtggaaatacagccaagagattgcca
gaaaatgaaaaggctggtgagcctgtaggtgcttcttcatctgtgtgctcaggaaatagt
gtagaaaaaacttctaatgacaggaaaataaatatgaagaggaaaaaatgtcgtgatgcc
gaggagtcagaaggacaaagtgaagatttagaagaagaatgtgcgggtgctaaaaaagca
gctcctgctcgaggaggttcgggctccaaaagaagccgagcagcagaagtgcataattta
tctgaaaggaggcgcagagacagaattaatgaaaagatgcgagcgctacaagaactcata
cccaactgcaacaaggtggacaaagcttcaatgcttgatgaggcaattgagtatctgaag
actcttcaacttcaagtacagattatgtcaatgggagctggaatgtatatgccacctatg
atgttaccaactggaatgcaacaatttcatgcagcgcatctaccccatttctcccccatg
ggtgttgggatgggaatgggcatgggaatgggttttggtatgaacatgctagacatgaat
ggtggacctcgtggatgctccatgattccgatgtcctcaatgcaaggagcgcattttccc
tccccacctatgtcggcgtctgctaattttcaaggcgtgggtggaggccaccttccggtc
tttggtcatcctagtcaagggtttcccatgtcagcagcaggagcacacttggcacctagt
aactcagccggcggaatgattggcttaaagatgggggttaatgtggaagtttcaaatgca
gttccagctccaactatggaatccaagaatttgataaagaatgccaacttacaggatatg
caaagtgctgaaaccaggatttcattgaacccgcagtctagtcagttccatgcaacaaat
gaagagtttgaccagtctgctttggcgcgggaaactgatcaagggccagatggttccagg
ccagatgttggtggcggtgcagatgataactcgacgaggaataatgacacactacctagc
agagatcctatgaacttgcatttctatctgcaggtagtgattgatagcaacaattga
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