Apium graveolens (celery): 141705003
Help
Entry
141705003 CDS
T11340
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agrv03036
]
141705003
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141705003
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
141705003
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
141705003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PaaX_C
Motif
Other DBs
NCBI-GeneID:
141705003
NCBI-ProteinID:
XP_074364189
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MDLKQRKVDRAQILKTCCSRVKCFIETDGGFYPTPSKTDLSHHHCYTTALKNFGQKSLEK
DRDVNVEIFKDGKKLSLQQVEKQYQDWIFQMHNLYDEESDCGEDEHVIIINPSNKKQLVI
SSDVIRVHRHIRRKGKSWRSGQKIKVLKGACSGVYKNNIYCVLEYILLEGFQGDAGGETR
IICRQLGISDEKGCLIFEDEDGNPAIDIRESKSLPISIIDTGKCLSVETAEWISQLEKRQ
KKIPSSIDILSASHCEELEVEGSLPFDAVVTAGHASPDEVIAVVRPASYGSVAVSEKLDQ
KHIAVTDLDMVLEIKLNAEDKDLQKTSHVHSFRASPSSRKGFRGLYIFSVNPKLIFEKAG
EYTFSFHIILQKESDCSSYVNSVRVKAQSQVKRWALVSDMQHAKLSVRVGSHFPPISISC
YDVYENRTSFRHVPKLIAKVSTKQGVILFQSETLKSHLLSKCSVITAENILVKSSEVDLI
RPGYEAQLTICSKDEPFDVSVPCKVLPGSIDHLNAKPKDFMKHLLPGNVVQELELEVFDA
YGNHVKQGSDLSLGVDGFHFQQKTNIVQVDDHGRVDLSGLLKVSKGYGESVSLSVFSSKS
NKLLFKVKSQIEKRMLRVATKIPEKCCAGSQLEDVVFEIVNSDGVVDETIDDNEKGDMSH
SLVLKSDSTDMDDTVKYSFRHGCCTVRTIQLPEIEGSFSFRAAHSRFPKLNMTITVLVET
APEIVYESSQPQCTAEEISLQNNLSGFRIPKVEHDDNAMVLGPSPDSAKSIGNLVKSLYD
ERKELEDKFLQDGRRIGEHEQKLKTFHAQRLEYEKALSELQASLEANSNGDSSNSPKKER
MLGEIESRAHTAASVVCKVLKDKKYHDFSKDILGVVALLGSVETNELARILTEFLGEEQM
LGVVCKSYKAAHNLETCDVHGNVNCSTGLQALASALGTSLDGRYSVICLEDVRPYEGECD
SGDPQRRLLLSDPTLPNGKTPPGFSGYAVNMIYLDANQLYTRTSGGKGLRETLFYHILGE
VQVYRTRETMRKALECIHHGAVSLDGGIVRKTGVISLGCGKPSIHFPVVAPQSQNSRYQR
MIDAKKSMLRTINDQLDKENELYDETLKKFEKSKNKYAKFLDAKASLLQQFNDSAWNSP
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaagcaacgaaaggttgacagggcccaaatattgaagacatgttgctcaaga
gtgaaatgcttcattgaaactgatggtggcttttacccaaccccatcgaagaccgattta
tcacatcaccattgttacaccactgctttgaagaactttggccagaagtctttagagaaa
gatagagatgtaaatgttgaaatttttaaagatggaaagaaactatcacttcagcaagtg
gagaaacaatatcaagactggattttccagatgcataatctctatgatgaagagagtgat
tgtggtgaggatgaacatgttatcatcattaatccctcaaacaagaaacagcttgtgatt
tcttcagatgttatcagggttcatagacacatcaggaggaagggaaaatcctggcggtcg
ggacagaaaattaaagttttgaaaggagcgtgctcaggagtttataaaaacaatatctat
tgtgttctagaatacattcttttagaaggatttcaaggcgatgcaggtggggaaactcga
attatctgcaggcagttaggtatttcagatgaaaagggatgccttatttttgaggacgaa
gacggaaatccagcaatagatatccgtgaatctaagtcacttcctattagtattattgat
acgggaaagtgtctgtctgttgaaactgccgagtggatttcgcaacttgaaaagcggcag
aagaaaattccatcatcaatcgatattcttagtgccagtcattgtgaagaactggaagtt
gaagggtcattgccttttgatgctgtcgtcactgctggtcatgcttctcccgacgaagtt
atagcagttgttcgtcctgcctcttatggtagtgtggcggtttctgaaaaattagaccag
aagcatattgcagtgacagacttagatatggttctagaaataaaattaaatgctgaagat
aaggatctacaaaaaactagccatgttcattcttttcgtgcttcaccttcatctcgtaaa
gggtttcgtggtctatatatattctcagtgaaccccaaattgatatttgaaaaagctggt
gaatatacattttcctttcacattattcttcagaaagaatcggactgcagtagttatgtt
aatagtgtaagggttaaggcacagtcccaggttaagaggtgggcgcttgtgagtgatatg
caacatgcaaagcttagtgtaagggttggttcgcatttccccccaatttctatttcatgc
tacgatgtctatgaaaaccgtacatcatttcggcatgtccctaaattgatagctaaagtt
tcaacaaagcagggtgttattttgtttcaatctgaaacactgaaatcgcatcttttatcc
aaatgttcagttattacggcagagaacatactggttaaaagtagcgaagtggacctaatt
cgccctggctatgaagcccagttaacgatatgttcaaaagatgaaccctttgacgtgagc
gttccatgcaaagttcttccaggatcaatagaccatcttaatgctaaaccaaaagatttt
atgaagcatctacttcctggaaatgttgtgcaagagctcgaactagaggtgtttgatgcc
tatggtaatcacgttaaacaaggttcagatttgtcattgggtgtggatggatttcatttt
caacagaaaacaaacatagtacaggtggatgatcatggacgtgttgatctcagtggtctc
ttgaaagtttcaaaaggctatggggaaagtgtatccctttctgttttctcaagcaaaagc
aacaaattgctttttaaagtgaagtcccaaattgagaaaagaatgcttagagttgcaact
aagatacctgagaaatgttgtgctggttctcaactggaagatgttgtgtttgaaattgtt
aactctgatggtgttgtggatgaaacaatcgatgataacgagaagggtgacatgtcccat
tctcttgtattgaagtctgattcaacagatatggatgatactgtgaaatacagctttcgt
catggttgctgcactgttcgtactattcagctccctgaaatagaaggaagcttctccttt
cgtgctgcacattctcgcttcccaaagctcaacatgaccataacggtgcttgtagagaca
gcccctgaaattgtgtatgagagtagccagcctcagtgtacagctgaagaaatctcactc
caaaataatttatctggttttagaattccaaaagttgagcatgacgataatgcaatggtg
ctgggaccaagcccagactctgctaagagcataggaaacttagttaagagcctttatgat
gagcggaaggaacttgaagacaagtttttgcaggatggaaggcgcattggagagcatgaa
caaaagcttaaaacattccatgcccaacggttggaatatgagaaagccctgtccgaattg
caagcttcactggaagctaattctaatggggattcaagtaattcacctaaaaaagagaga
atgttgggagagattgaatcaagggctcacacagctgcttctgttgtctgcaaagtactg
aaagacaagaaatatcatgatttctcaaaagatattttaggtgtggttgcgcttcttgga
agtgttgaaacaaatgagcttgccaggattttgacagagttccttggagaggagcaaatg
cttggagttgtgtgtaaatcctataaagctgctcataatcttgaaacgtgtgatgtacat
ggaaatgtgaactgttccactggtcttcaagcattggcatctgcacttggcacatcttta
gatggacgttattctgttatctgtcttgaagatgtaaggccatacgaaggcgaatgtgac
agtggagatcctcagagaaggcttttgttgtctgatcctactttaccaaatggaaagact
ccaccaggattttcaggatatgctgtcaatatgatatatttggatgctaatcagttatac
acaaggacttctggaggtaaaggtctacgggagaccttattctatcatattttaggtgag
gtacaggtttatagaactagggaaacaatgagaaaagcactagaatgcatccaccatggt
gcggtttctttggatggaggtatcgtaaggaaaactggagttatttctctaggatgtggg
aaaccctctatacactttccagttgttgcacctcaaagtcaaaattctcgctatcaacgt
atgattgatgcaaagaagtccatgttgagaacaataaatgaccagctagacaaagaaaat
gaattatatgacgagaccctgaaaaagtttgagaagagcaaaaacaagtatgcgaaattc
ttggatgcaaaggcatcattactgcaacagttcaatgatagtgcatggaactccccctag
DBGET
integrated database retrieval system
