Apium graveolens (celery): 141707648
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Entry
141707648 CDS
T11340
Name
(RefSeq) ABC transporter I family member 21
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141707648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141707648
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141707648
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
nSTAND3
AAA_15
NACHT
SMC_N
AAA_28
AAA_18
AAA_24
AAA
AAA_23
AAA_30
AAA_22
AAA_5
SRP54
AAA_25
PduV-EutP
AAA_33
nSTAND_NTPase5
AAA_14
AAA_16
Arf
ATP-synt_ab
Zeta_toxin
Sigma54_activat
AAA_7
Motif
Other DBs
NCBI-GeneID:
141707648
NCBI-ProteinID:
XP_074367041
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All DBs
Position
2:complement(91776196..91779596)
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AA seq
289 aa
AA seq
DB search
MANEGEEGNGIRVKGMQFGYDIQNPLFVDFTLNISPGSRCLLVGANGSGKTTLLKILAGK
HMVGGRDVVQVLNCSAFHDTHLVCSGDLSYLGGSWTKTVGSAGEIPLQGDFSAEHMIFGV
EGIDPIRREKLIELLDIDLRWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVA
RMDLLDFFKEECEQRGATIVYATHIFDGLETWATDLAYIQDGELRRTEKLSELSELKHAA
NLLSVVECWLRSETKIEKKKPANNSSQVKKSSPFDSSPFRSTRHMAYYR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgaaggtgaagaaggtaatgggattcgggtcaagggaatgcaattcgggtat
gatattcaaaacccgttatttgttgacttcacccttaatatctctcccggatctcgatgc
ctcctcgtcggtgccaatggatctgggaagacaactttgctgaagattttggctggaaaa
catatggttggtggaagagatgtagtgcaggtcttgaattgttcagcttttcatgacaca
cacctggtttgtagtggggacttgtcctatttgggaggatcctggactaaaacagtgggc
tctgcaggtgaaatcccacttcaaggagacttctctgctgagcacatgatatttggagtt
gaagggattgatcctataagacgtgagaagttgattgaattgcttgatattgatttaaga
tggcgtatgcacaaggtttctgatggtcagagacgccgagtccaaatctgtatggggctt
ctccatccttttcaggttcttttgttagatgaggttacagttgacctagatgttgttgca
aggatggatttgcttgacttcttcaaggaagagtgcgagcagagaggagctacaattgtg
tatgcaacacatatatttgatggattggagacatgggccacggatctggcttacatacaa
gatggagaattaaggaggacagagaaattatcagagcttagtgagttaaaacacgctgct
aatctgctttcagtggttgagtgctggctgcgttctgaaaccaagatagagaaaaagaaa
cctgctaataattcgtcccaagtcaagaaatcatctcctttcgattcttccccttttaga
tcaactagacacatggcttactaccgctga
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