Agrobacterium sp. 13-2099-1-2: A6U84_08100
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Entry
A6U84_08100 CDS
T11288
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz01501
beta-Lactam resistance
agrz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A6U84_08100
01503 Cationic antimicrobial peptide (CAMP) resistance
A6U84_08100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agrz03036
]
A6U84_08100
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agrz02000
]
A6U84_08100
01504 Antimicrobial resistance genes [BR:
agrz01504
]
A6U84_08100
Chromosome and associated proteins [BR:
agrz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
A6U84_08100
Transporters [BR:
agrz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
A6U84_08100
Antimicrobial resistance genes [BR:
agrz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
A6U84_08100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
BSH_CzcB
RND-MFP_C
Beta-barrel_RND
BSH_CusB
Biotin_lipoyl
BSH_YknX
ARC6-like_IMS
Motif
Other DBs
NCBI-ProteinID:
UZX40725
LinkDB
All DBs
Position
Circular:complement(1621454..1622620)
Genome browser
AA seq
388 aa
AA seq
DB search
MRVWKQVGVCLAVAGAGLCLWGFYSPEARNLLAGIGIGKTPVGAVEVAASGARTPGSSSG
QNAGAARRDGNATLVAMAPVKQGTVNDRLNAIGSGEAIQSVVVMPQTSGTLSEIRISSGA
RVVKGQVLARLDDEEQVIERDKAQVALRSAVEKSSSYSNLKSVSRLDVLDAQIAEEAAKL
ALSTAELNLRRRDIVAPIEGVVGIVAANIGDNVTTQSTIVGIDDRSQILVNFWAPERFVT
AITVGMPVEATSISRPGETFKGEVEAVDNRVDAASRTIRIRARFANDKDELRAGMSFGVT
MRFAGETYASVDPLAVQWDAEGSYVWRVTDNKSAKVRVQIVQRNPDAVLVKAELAEGDQV
VTEGLQRVREGGAVRVASQPKPEEVASQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgtggaaacaggtgggtgtctgtcttgctgtggcgggagcaggactctgtctt
tgggggttttattcacccgaagcgcggaatctgctcgcgggtatcggcatcggcaaaaca
cctgttggcgcggtcgaggttgccgcatccggtgccagaacacctggttcgtcatccggc
caaaatgccggcgccgcacgccgcgatggcaatgcgaccctggtggcgatggccccggtc
aagcagggcacggtcaatgacaggctgaacgccatcggcagtggcgaggccatccagtcg
gtcgtcgtcatgccgcagacatcaggcacgctttcggaaatccgcatttcatccggcgcc
cgcgtcgtaaaggggcaggtgctcgcgcggctcgatgacgaggagcaggtgatcgagcgg
gacaaggcgcaggttgcgctacgcagcgccgtcgaaaaatcgagttcctacagtaacctg
aaatccgtatcccgccttgatgtgctggatgcgcagattgccgaggaagccgccaagctt
gcactgagcaccgccgagctgaacctcaggcgccgcgacatcgtcgcaccgattgagggt
gttgtcgggatcgtggccgccaatatcggcgacaatgtcaccacgcaatctacgatcgtc
ggcattgatgaccgttctcaaattctggtcaatttctgggcgccggaacggttcgtaact
gcaattaccgtcggaatgcctgtagaggccacctcgatttcacgccccggcgagacgttc
aagggtgaggtcgaggccgtcgacaaccgtgtcgacgccgcaagccgtaccatccgcatc
cgggcacggtttgctaacgacaaggatgagcttcgggccggtatgtccttcggtgttacc
atgcgttttgccggagagacctatgcatccgtcgatccgctggccgtgcagtgggatgcc
gaaggttcctatgtctggcgcgtgaccgacaataaatcggccaaggtgcgggtgcagatc
gtgcagcgtaaccccgatgccgttctcgtgaaagcggaactggcggaaggcgatcaggtc
gtgaccgaaggattgcagcgggtgcgggagggtggtgccgtccgtgtcgcaagccagccg
aagcccgaggaggttgccagccaatga
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